| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is purK [H]
Identifier: 159897424
GI number: 159897424
Start: 1022779
End: 1023924
Strand: Reverse
Name: purK [H]
Synonym: Haur_0895
Alternate gene names: 159897424
Gene position: 1023924-1022779 (Counterclockwise)
Preceding gene: 159897425
Following gene: 159897423
Centisome position: 16.13
GC content: 54.19
Gene sequence:
>1146_bases ATGACAAAACGTTTAGGAATTCTTGGTGGCGGCCAATTGGCGCGGATGTTGGTGCAAGCGGCGATTCCCTTGGGAATTGA AACCGTGGTTTTGGCCAACCGCAACGATGAGCCAGCGGCATTGGTCAGCAAAGCGGTGGTTGGCGAGTGGAGTGATCGAG CCTTGCTTGATCAATTTGCTCAAGCGGTTGATGTGGTAGTGCTGGAAAACGAGTTTATTGGCTCGGAAAAATTGGCCTAC CTTGCCAGCAAAGGCGTGCAACTTGTCCCCGATCAGGCAACGCTGGGCTTGATTGAGGATAAAGCGCAACAAAAATTAAC ATTGGCAGCCGCAGGCCTGCCTGTACCAGCCTTGGCCTTAATCGAATCGTTGGACGATGTGGCGGCCTTTGGGGCTGAAC ATGGTTTCCCGTTGATGCTGAAAACGCGGCGCAACGGCTACGATGGCCGTGGCACGGCCAAAATCCGCAGCGCCGAAGAG ATTGCCAGCGCTTGTAGCTCCTTGGGTTTTCCCGAAAATCCAGTGTTTGTTGAGGCATGGGTTCCCTTCGAAGCCGAGTT GGCAACCTTGATTATTCGCTCGGTCAGCGGCGAACAATGCGTCTATCCAGTGATTGAAACCTACCAACCGAGCGGCGTTT GTCGGGTGGTGCGTGCACCAGCACCCTTCTCAGCAGCAATTCAACAACAGGCCAGCGAGGTTGCTCAAGCGACGGCAGCA GCGCTTGGTGGCTTAGGCATCTTGGCGGTTGAAATGTTTCTGACCAGCAAGGGCCAAATTTTGGTCAATGAGCTAGCGCC CCGTCCACACAACACTGGTCACTATTCAATTGAGGGTTGTTATTGTTCACAATTTGAAAATACGATTCGTGCTGCGCTGG GCTGGCCGTTGGGTGATCCTCAGTTGCGCCACCAAAGTGCCGTGATGGTCAATGTGCTCGCGCCAACCACACGACCACTT GAAAGCAGCTTGATTCAAACGGCGCTCAAACCACAGGTGCATGTGCATTGGTACGACAAACGCAGCGCCAAGCCAGGCCG TAAAATTGGCCATATCACCGCTGTAGGAGCCGAACCAAGCGAAGTCGAAGCGCGTGCCCAAGCCGCCGTCGATCAGCTAG AGCGGGTTTTAGCTGAACCCGTATAA
Upstream 100 bases:
>100_bases CGATCCTTACGAACCGTATGAATCATTACACCTATAATCAAAAGCTTCGTGCTCTTCATGGTTAAATCTAGACTATTAAC TTATAGCTCATTAAGGCATT
Downstream 100 bases:
>100_bases TTGAGCAAACCAACCCACATGTCAAGCCAATCGAGCGTTGCAATGACGCACCTCGATCAACGCTTGGCATTTTTAATTTC TCGCCAAAGGAGCATTATGT
Product: phosphoribosylaminoimidazole carboxylase, ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTKRLGILGGGQLARMLVQAAIPLGIETVVLANRNDEPAALVSKAVVGEWSDRALLDQFAQAVDVVVLENEFIGSEKLAY LASKGVQLVPDQATLGLIEDKAQQKLTLAAAGLPVPALALIESLDDVAAFGAEHGFPLMLKTRRNGYDGRGTAKIRSAEE IASACSSLGFPENPVFVEAWVPFEAELATLIIRSVSGEQCVYPVIETYQPSGVCRVVRAPAPFSAAIQQQASEVAQATAA ALGGLGILAVEMFLTSKGQILVNELAPRPHNTGHYSIEGCYCSQFENTIRAALGWPLGDPQLRHQSAVMVNVLAPTTRPL ESSLIQTALKPQVHVHWYDKRSAKPGRKIGHITAVGAEPSEVEARAQAAVDQLERVLAEPV
Sequences:
>Translated_381_residues MTKRLGILGGGQLARMLVQAAIPLGIETVVLANRNDEPAALVSKAVVGEWSDRALLDQFAQAVDVVVLENEFIGSEKLAY LASKGVQLVPDQATLGLIEDKAQQKLTLAAAGLPVPALALIESLDDVAAFGAEHGFPLMLKTRRNGYDGRGTAKIRSAEE IASACSSLGFPENPVFVEAWVPFEAELATLIIRSVSGEQCVYPVIETYQPSGVCRVVRAPAPFSAAIQQQASEVAQATAA ALGGLGILAVEMFLTSKGQILVNELAPRPHNTGHYSIEGCYCSQFENTIRAALGWPLGDPQLRHQSAVMVNVLAPTTRPL ESSLIQTALKPQVHVHWYDKRSAKPGRKIGHITAVGAEPSEVEARAQAAVDQLERVLAEPV >Mature_380_residues TKRLGILGGGQLARMLVQAAIPLGIETVVLANRNDEPAALVSKAVVGEWSDRALLDQFAQAVDVVVLENEFIGSEKLAYL ASKGVQLVPDQATLGLIEDKAQQKLTLAAAGLPVPALALIESLDDVAAFGAEHGFPLMLKTRRNGYDGRGTAKIRSAEEI ASACSSLGFPENPVFVEAWVPFEAELATLIIRSVSGEQCVYPVIETYQPSGVCRVVRAPAPFSAAIQQQASEVAQATAAA LGGLGILAVEMFLTSKGQILVNELAPRPHNTGHYSIEGCYCSQFENTIRAALGWPLGDPQLRHQSAVMVNVLAPTTRPLE SSLIQTALKPQVHVHWYDKRSAKPGRKIGHITAVGAEPSEVEARAQAAVDQLERVLAEPV
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=376, Percent_Identity=31.1170212765957, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1788155, Length=379, Percent_Identity=25.8575197889182, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6324702, Length=377, Percent_Identity=36.3395225464191, Blast_Score=229, Evalue=7e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 40603; Mature: 40472
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRLGILGGGQLARMLVQAAIPLGIETVVLANRNDEPAALVSKAVVGEWSDRALLDQFA CCCCEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHH QAVDVVVLENEFIGSEKLAYLASKGVQLVPDQATLGLIEDKAQQKLTLAAAGLPVPALAL HHHEEEEEECCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHEEEEECCCCHHHHHH IESLDDVAAFGAEHGFPLMLKTRRNGYDGRGTAKIRSAEEIASACSSLGFPENPVFVEAW HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEEE VPFEAELATLIIRSVSGEQCVYPVIETYQPSGVCRVVRAPAPFSAAIQQQASEVAQATAA CCCHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH ALGGLGILAVEMFLTSKGQILVNELAPRPHNTGHYSIEGCYCSQFENTIRAALGWPLGDP HHCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCH QLRHQSAVMVNVLAPTTRPLESSLIQTALKPQVHVHWYDKRSAKPGRKIGHITAVGAEPS HHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCH EVEARAQAAVDQLERVLAEPV HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKRLGILGGGQLARMLVQAAIPLGIETVVLANRNDEPAALVSKAVVGEWSDRALLDQFA CCCEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHH QAVDVVVLENEFIGSEKLAYLASKGVQLVPDQATLGLIEDKAQQKLTLAAAGLPVPALAL HHHEEEEEECCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHEEEEECCCCHHHHHH IESLDDVAAFGAEHGFPLMLKTRRNGYDGRGTAKIRSAEEIASACSSLGFPENPVFVEAW HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEEE VPFEAELATLIIRSVSGEQCVYPVIETYQPSGVCRVVRAPAPFSAAIQQQASEVAQATAA CCCHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH ALGGLGILAVEMFLTSKGQILVNELAPRPHNTGHYSIEGCYCSQFENTIRAALGWPLGDP HHCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCH QLRHQSAVMVNVLAPTTRPLESSLIQTALKPQVHVHWYDKRSAKPGRKIGHITAVGAEPS HHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCH EVEARAQAAVDQLERVLAEPV HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA