| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is gpmI
Identifier: 159897411
GI number: 159897411
Start: 1004869
End: 1006497
Strand: Reverse
Name: gpmI
Synonym: Haur_0882
Alternate gene names: 159897411
Gene position: 1006497-1004869 (Counterclockwise)
Preceding gene: 159897413
Following gene: 159897410
Centisome position: 15.86
GC content: 54.14
Gene sequence:
>1629_bases ATGACAACACCGCGTCCTGTGTTGTTAGCCATAATGGATGGTTGGGGTTTGGCTCCGGCTGGCCCGGGCAACGGCGTTAG TTTAGCCAACACTCCCAATGTTAATCATTGGATGGCAACCTGCCCAACCACCCAACTGCATGCCTCTGGCCTTGATGTTG GCTTGCCCGAAGGTCAAATTGGCAACAGTGAAGTCGGCCACTTGAATATCGGCGCTGGCTTGGTAGTCTATCAAGATTCC ACCCGCATCAGTGAATCGATCAAATCTGGTGAGTTTTTTGAGAATCCAGCGTTTCTCGAAGCTGTCCAAATCGTCAAAGA ACGTGGCACAAATATGCACTTGATCGGTCTGATTGGCCGTGGCGGCGTGCATGCCTATGATATTCACCTCGCAGGCTTGT TGCAATTGATGGCTCAGCAAGGGGTCAATCACACCTACATTCATGCTTTTATGGATGGCCGCGATACCTTGCCGCAAAGT GGCCTTGGGTATATGCGAGAGTTGCAACAAACGATCAGCCAAATCGGCGTAGGCCAAGTGGCAAGCGTGATTGGCCGCTA TTATGCCATGGATCGCGATAAGCGCTGGGAGCGCGTCGGCGCTGCCTATGCTGCCATGGTCGAAGGCGTTGGCCACACTG CCAGCGATCCAATCAGCGCGATCGAGCAAGCGTATTTGCGCGATGCTCGCGGCGATGAATTTATCGAAGCAACGGTCATC ACCGATAGCGCAGGCGTGGCCTTACCCCGGATCAGCACTGGCGATGTAGTGATTTGTTTCAATTTCCGCGCCGATCGGGT ACGCCAAATTACCCGTGCCTTGATGCAGTCCGATCTCAACACCATGATCCAAGAATGGTATGCCAATCAAGCCGAACAAG GCTTGCAATTGCCGACCACCATTTGGCAACGGCCTGAGCAAGTATCAAATCTGCATTATGTCACGATGACACAGTATGAT GCGACCTTCCCGTATGCGATTGCCTATCCGCCGCATTACATCACTGAGCCATTAGCCAAAGTGATCGCCGATGCTGGCAA GCGCCAATATCACAGCGCCGAAACCGAAAAATACCCGCATGTCACGTTCTTCTTGAATGGGCGGCGCGAGGAACCTTTTG CTGGCGAGGATCGGGTGATGGCGGCCTCGCCCAAAGTCGCCACCTACGATCTTCAGCCCGAAATGAGCGCAGAAGAAGTA GCTGCCAAATTGCTCGATGCGGTCAACAGCCAAATCTACGATTTCTTGGTGGTCAACTTTGCCAACCCTGATATGGTCGG CCATACTGGGGTGATTCCGGCGGTGGTAAAAGCCTGCGAAACTGTTGATCGTTGCTTGGGCCAAGTTGTGCCAGCAGTGG TTGCCCAAGGTGGTGCAGCCATCTTGATCGCCGACCATGGCAATGCTGAGCAGATGATTGATCCGCAAACAGGCGGCCCC CACACGGCCCACACCACCAATCTTGTGCCATGTATTTTGGTCGCCGACCCAGCTACAGGCCTAACCCGCGAACAGATCAG CCTGCGGGCTGGTGGCCGTTTGGCCGATCTGGCCCCAACCATCCTTGATTTGCTGGGCTTGCAAAAGGCCGCCGCCATGA CCGGAACCAGCTTGATCGAAACCAAATAA
Upstream 100 bases:
>100_bases TCCCTATTATGCTCATTGTAGGTGAAGCCTTTGCTACTTGCACTTTTGGCACTTTTCTCGTTAAATAGAGCCAACATGTT AACGTTTACAAGGAGTAATC
Downstream 100 bases:
>100_bases GAATAAGCCACTGATTTAGCCCGCTGACACGATTAACGTCAGCGGGCTTTTTTGATCTGTATAGATAGTGGTATGCGTTT AGTATCCTATCCTACGGATG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MTTPRPVLLAIMDGWGLAPAGPGNGVSLANTPNVNHWMATCPTTQLHASGLDVGLPEGQIGNSEVGHLNIGAGLVVYQDS TRISESIKSGEFFENPAFLEAVQIVKERGTNMHLIGLIGRGGVHAYDIHLAGLLQLMAQQGVNHTYIHAFMDGRDTLPQS GLGYMRELQQTISQIGVGQVASVIGRYYAMDRDKRWERVGAAYAAMVEGVGHTASDPISAIEQAYLRDARGDEFIEATVI TDSAGVALPRISTGDVVICFNFRADRVRQITRALMQSDLNTMIQEWYANQAEQGLQLPTTIWQRPEQVSNLHYVTMTQYD ATFPYAIAYPPHYITEPLAKVIADAGKRQYHSAETEKYPHVTFFLNGRREEPFAGEDRVMAASPKVATYDLQPEMSAEEV AAKLLDAVNSQIYDFLVVNFANPDMVGHTGVIPAVVKACETVDRCLGQVVPAVVAQGGAAILIADHGNAEQMIDPQTGGP HTAHTTNLVPCILVADPATGLTREQISLRAGGRLADLAPTILDLLGLQKAAAMTGTSLIETK
Sequences:
>Translated_542_residues MTTPRPVLLAIMDGWGLAPAGPGNGVSLANTPNVNHWMATCPTTQLHASGLDVGLPEGQIGNSEVGHLNIGAGLVVYQDS TRISESIKSGEFFENPAFLEAVQIVKERGTNMHLIGLIGRGGVHAYDIHLAGLLQLMAQQGVNHTYIHAFMDGRDTLPQS GLGYMRELQQTISQIGVGQVASVIGRYYAMDRDKRWERVGAAYAAMVEGVGHTASDPISAIEQAYLRDARGDEFIEATVI TDSAGVALPRISTGDVVICFNFRADRVRQITRALMQSDLNTMIQEWYANQAEQGLQLPTTIWQRPEQVSNLHYVTMTQYD ATFPYAIAYPPHYITEPLAKVIADAGKRQYHSAETEKYPHVTFFLNGRREEPFAGEDRVMAASPKVATYDLQPEMSAEEV AAKLLDAVNSQIYDFLVVNFANPDMVGHTGVIPAVVKACETVDRCLGQVVPAVVAQGGAAILIADHGNAEQMIDPQTGGP HTAHTTNLVPCILVADPATGLTREQISLRAGGRLADLAPTILDLLGLQKAAAMTGTSLIETK >Mature_541_residues TTPRPVLLAIMDGWGLAPAGPGNGVSLANTPNVNHWMATCPTTQLHASGLDVGLPEGQIGNSEVGHLNIGAGLVVYQDST RISESIKSGEFFENPAFLEAVQIVKERGTNMHLIGLIGRGGVHAYDIHLAGLLQLMAQQGVNHTYIHAFMDGRDTLPQSG LGYMRELQQTISQIGVGQVASVIGRYYAMDRDKRWERVGAAYAAMVEGVGHTASDPISAIEQAYLRDARGDEFIEATVIT DSAGVALPRISTGDVVICFNFRADRVRQITRALMQSDLNTMIQEWYANQAEQGLQLPTTIWQRPEQVSNLHYVTMTQYDA TFPYAIAYPPHYITEPLAKVIADAGKRQYHSAETEKYPHVTFFLNGRREEPFAGEDRVMAASPKVATYDLQPEMSAEEVA AKLLDAVNSQIYDFLVVNFANPDMVGHTGVIPAVVKACETVDRCLGQVVPAVVAQGGAAILIADHGNAEQMIDPQTGGPH TAHTTNLVPCILVADPATGLTREQISLRAGGRLADLAPTILDLLGLQKAAAMTGTSLIETK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family
Homologues:
Organism=Escherichia coli, GI1790041, Length=540, Percent_Identity=43.3333333333333, Blast_Score=456, Evalue=1e-129, Organism=Caenorhabditis elegans, GI32564249, Length=537, Percent_Identity=41.1545623836127, Blast_Score=405, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17507741, Length=537, Percent_Identity=41.1545623836127, Blast_Score=405, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPMI_HERA2 (A9AYE8)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001543658.1 - ProteinModelPortal: A9AYE8 - SMR: A9AYE8 - GeneID: 5732783 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_0882 - HOGENOM: HBG613255 - OMA: DHGNAEL - ProtClustDB: PRK05434 - BioCyc: HAUR316274:HAUR_0882-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_01038 - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 - Gene3D: G3DSA:3.40.720.10 - Gene3D: G3DSA:3.40.1450.10 - PIRSF: PIRSF001492 - TIGRFAMs: TIGR01307
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core; SSF64158 BPG-indep_PGM_N
EC number: =5.4.2.1
Molecular weight: Translated: 58505; Mature: 58374
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: ACT_SITE 63-63
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRPVLLAIMDGWGLAPAGPGNGVSLANTPNVNHWMATCPTTQLHASGLDVGLPEGQI CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCC GNSEVGHLNIGAGLVVYQDSTRISESIKSGEFFENPAFLEAVQIVKERGTNMHLIGLIGR CCCCCCEEEECCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEC GGVHAYDIHLAGLLQLMAQQGVNHTYIHAFMDGRDTLPQSGLGYMRELQQTISQIGVGQV CCCEEEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHH ASVIGRYYAMDRDKRWERVGAAYAAMVEGVGHTASDPISAIEQAYLRDARGDEFIEATVI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEE TDSAGVALPRISTGDVVICFNFRADRVRQITRALMQSDLNTMIQEWYANQAEQGLQLPTT ECCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH IWQRPEQVSNLHYVTMTQYDATFPYAIAYPPHYITEPLAKVIADAGKRQYHSAETEKYPH HHCCCHHHCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCE VTFFLNGRREEPFAGEDRVMAASPKVATYDLQPEMSAEEVAAKLLDAVNSQIYDFLVVNF EEEEECCCCCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEE ANPDMVGHTGVIPAVVKACETVDRCLGQVVPAVVAQGGAAILIADHGNAEQMIDPQTGGP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCC HTAHTTNLVPCILVADPATGLTREQISLRAGGRLADLAPTILDLLGLQKAAAMTGTSLIE CCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHC TK CC >Mature Secondary Structure TTPRPVLLAIMDGWGLAPAGPGNGVSLANTPNVNHWMATCPTTQLHASGLDVGLPEGQI CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCC GNSEVGHLNIGAGLVVYQDSTRISESIKSGEFFENPAFLEAVQIVKERGTNMHLIGLIGR CCCCCCEEEECCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEC GGVHAYDIHLAGLLQLMAQQGVNHTYIHAFMDGRDTLPQSGLGYMRELQQTISQIGVGQV CCCEEEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHH ASVIGRYYAMDRDKRWERVGAAYAAMVEGVGHTASDPISAIEQAYLRDARGDEFIEATVI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEE TDSAGVALPRISTGDVVICFNFRADRVRQITRALMQSDLNTMIQEWYANQAEQGLQLPTT ECCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH IWQRPEQVSNLHYVTMTQYDATFPYAIAYPPHYITEPLAKVIADAGKRQYHSAETEKYPH HHCCCHHHCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCE VTFFLNGRREEPFAGEDRVMAASPKVATYDLQPEMSAEEVAAKLLDAVNSQIYDFLVVNF EEEEECCCCCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEE ANPDMVGHTGVIPAVVKACETVDRCLGQVVPAVVAQGGAAILIADHGNAEQMIDPQTGGP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCC HTAHTTNLVPCILVADPATGLTREQISLRAGGRLADLAPTILDLLGLQKAAAMTGTSLIE CCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHC TK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA