Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897410

Identifier: 159897410

GI number: 159897410

Start: 1003802

End: 1004428

Strand: Reverse

Name: 159897410

Synonym: Haur_0881

Alternate gene names: NA

Gene position: 1004428-1003802 (Counterclockwise)

Preceding gene: 159897411

Following gene: 159897398

Centisome position: 15.83

GC content: 43.06

Gene sequence:

>627_bases
ATGCGATGTTTGTTTATTCAAGGCTCATTAGTCACTTCATATGCAAACCTTGTACCGAAGGTATGCCCATCAGTCGGATG
TCCGTCGAATTCATTTCGCCGTCATCAGAAGATCCAAAAAACAGTGTACGATGTGCGCAATCCAACTGGACAGATTGCTG
CAACCCTAACCTTATATCGCTACAAATGTACGCTTTGTGGTTCAACCTTTCGCACAACCCCGCTGACAATGGTGCGAGGG
GCCACATTAAGTCGTGGGTTGTATCACCTCAGCGGAGTGCTTTTCCTGCTAGGGCTTAGCTATACCCAAGTTACAAAATT
CTTAAGTTCCTATACCGTCAATATCTCGCGAGCTACTGTTCATATGGCAGTTCAACGCCTAACTCATAACCAAGCATACA
GCCGTGCTCGAGTATTTACGAAAGTACGACGTGAAAGTAATCAATGCCTATTGATGTTCGCACCAGCAGCTATCTGGGTT
CCCTTGGAATTTATTCAAGAACATCATCAGTGGGCATTTCGGATTAATCTAGCAACAATTCCAGCAGAATATTTTCCATT
GCTTGAAAGTAGTTTAAATTCGCTAGAAACAATCAATTCTGCGGTAAAGCTTCGATTAATTCGTTAA

Upstream 100 bases:

>100_bases
CTTTATTTAATAAAATAAAAAAAGTATACTATTGTAATAATAAGCCAAGAAATTCTGCCTCTACAGAAGAATTCTATAGA
CTGTGTGACGAATACTGCTT

Downstream 100 bases:

>100_bases
CAACGCTCGCTAACGATAGCTCATATGCGGAAACCATCCAATTTCATAGTAGCTTGGAACCCGCAATCCCCAGTAGGCAA
TAAAAAATATGCCACCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYRYKCTLCGSTFRTTPLTMVRG
ATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATVHMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWV
PLEFIQEHHQWAFRINLATIPAEYFPLLESSLNSLETINSAVKLRLIR

Sequences:

>Translated_208_residues
MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYRYKCTLCGSTFRTTPLTMVRG
ATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATVHMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWV
PLEFIQEHHQWAFRINLATIPAEYFPLLESSLNSLETINSAVKLRLIR
>Mature_208_residues
MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYRYKCTLCGSTFRTTPLTMVRG
ATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATVHMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWV
PLEFIQEHHQWAFRINLATIPAEYFPLLESSLNSLETINSAVKLRLIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23593; Mature: 23593

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYR
CEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEHEE
YKCTLCGSTFRTTPLTMVRGATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATV
EEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEHHHHHH
HMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWVPLEFIQEHHQWAFRINLATI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCEEEEEEEEEC
PAEYFPLLESSLNSLETINSAVKLRLIR
CHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYR
CEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEHEE
YKCTLCGSTFRTTPLTMVRGATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATV
EEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEHHHHHH
HMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWVPLEFIQEHHQWAFRINLATI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCEEEEEEEEEC
PAEYFPLLESSLNSLETINSAVKLRLIR
CHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA