| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897410
Identifier: 159897410
GI number: 159897410
Start: 1003802
End: 1004428
Strand: Reverse
Name: 159897410
Synonym: Haur_0881
Alternate gene names: NA
Gene position: 1004428-1003802 (Counterclockwise)
Preceding gene: 159897411
Following gene: 159897398
Centisome position: 15.83
GC content: 43.06
Gene sequence:
>627_bases ATGCGATGTTTGTTTATTCAAGGCTCATTAGTCACTTCATATGCAAACCTTGTACCGAAGGTATGCCCATCAGTCGGATG TCCGTCGAATTCATTTCGCCGTCATCAGAAGATCCAAAAAACAGTGTACGATGTGCGCAATCCAACTGGACAGATTGCTG CAACCCTAACCTTATATCGCTACAAATGTACGCTTTGTGGTTCAACCTTTCGCACAACCCCGCTGACAATGGTGCGAGGG GCCACATTAAGTCGTGGGTTGTATCACCTCAGCGGAGTGCTTTTCCTGCTAGGGCTTAGCTATACCCAAGTTACAAAATT CTTAAGTTCCTATACCGTCAATATCTCGCGAGCTACTGTTCATATGGCAGTTCAACGCCTAACTCATAACCAAGCATACA GCCGTGCTCGAGTATTTACGAAAGTACGACGTGAAAGTAATCAATGCCTATTGATGTTCGCACCAGCAGCTATCTGGGTT CCCTTGGAATTTATTCAAGAACATCATCAGTGGGCATTTCGGATTAATCTAGCAACAATTCCAGCAGAATATTTTCCATT GCTTGAAAGTAGTTTAAATTCGCTAGAAACAATCAATTCTGCGGTAAAGCTTCGATTAATTCGTTAA
Upstream 100 bases:
>100_bases CTTTATTTAATAAAATAAAAAAAGTATACTATTGTAATAATAAGCCAAGAAATTCTGCCTCTACAGAAGAATTCTATAGA CTGTGTGACGAATACTGCTT
Downstream 100 bases:
>100_bases CAACGCTCGCTAACGATAGCTCATATGCGGAAACCATCCAATTTCATAGTAGCTTGGAACCCGCAATCCCCAGTAGGCAA TAAAAAATATGCCACCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYRYKCTLCGSTFRTTPLTMVRG ATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATVHMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWV PLEFIQEHHQWAFRINLATIPAEYFPLLESSLNSLETINSAVKLRLIR
Sequences:
>Translated_208_residues MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYRYKCTLCGSTFRTTPLTMVRG ATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATVHMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWV PLEFIQEHHQWAFRINLATIPAEYFPLLESSLNSLETINSAVKLRLIR >Mature_208_residues MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYRYKCTLCGSTFRTTPLTMVRG ATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATVHMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWV PLEFIQEHHQWAFRINLATIPAEYFPLLESSLNSLETINSAVKLRLIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23593; Mature: 23593
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYR CEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEHEE YKCTLCGSTFRTTPLTMVRGATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATV EEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEHHHHHH HMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWVPLEFIQEHHQWAFRINLATI HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCEEEEEEEEEC PAEYFPLLESSLNSLETINSAVKLRLIR CHHHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MRCLFIQGSLVTSYANLVPKVCPSVGCPSNSFRRHQKIQKTVYDVRNPTGQIAATLTLYR CEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEHEE YKCTLCGSTFRTTPLTMVRGATLSRGLYHLSGVLFLLGLSYTQVTKFLSSYTVNISRATV EEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEHHHHHH HMAVQRLTHNQAYSRARVFTKVRRESNQCLLMFAPAAIWVPLEFIQEHHQWAFRINLATI HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCEEEEEEEEEC PAEYFPLLESSLNSLETINSAVKLRLIR CHHHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA