| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897393
Identifier: 159897393
GI number: 159897393
Start: 978833
End: 979420
Strand: Reverse
Name: 159897393
Synonym: Haur_0864
Alternate gene names: NA
Gene position: 979420-978833 (Counterclockwise)
Preceding gene: 159897394
Following gene: 159897392
Centisome position: 15.43
GC content: 50.0
Gene sequence:
>588_bases ATGCATCAACCAACAACCATGACCAGCAATCGCGGGAATTTCAGTTTCAGCCGCCTGATGGAATTGCTCAACGGACGTTG GCATAAACGCGCTAGCTACGCTTTTTTGGTGATTGTGGCCGCTCACTGGGCCGAACATCTCAGCCAAGCCTTCCAAGTCT ATTCGCTGAATTGGAAGCTTTCCGAAGCCAATGGCGTACTTGGAATGTTCTTTCCATGGCTAATTAGCTCGGAATGGCTG CATTACAGCTATGCGATTGTGATGCTGGTGGGCTTGATTGTGCTGCGGCCAGCCTTCCAAGGGCGCTCACGCATTTGGTG GAATATCGCCTTAGGATTGCAAGTTTGGCATCACTTTGAACATTTCCTATTGCTGTTGCAGGCCTTGCTAGGCACAACCT TCTTTGGCTCACCAACCCGCACCAGCATTTTGCAACTGTTCTATGCCCGCATGGAGCTACACCTGTTCTACAACATCGTG GTGTTTTTGCCGATGATGGTCGCCATGTTCTACCATGTGTTGCCACCAATTGGCGAAAAAACTACCCCAACCTGTAGCTG TGCTTGGCATCAAAAGCCAGCGGTTTAA
Upstream 100 bases:
>100_bases CTGTATGCGACGGGCAGGCAATGAACTCCAGCCTGAGCCATTTCCAGCAGCCTTACGCGCGGCACTGCAACGATATTATC AATAAAAGGAGGAAGATCGC
Downstream 100 bases:
>100_bases GCAGCAGGCCAGCCCACCAAAACCACATGGTGGGCTGGACCAAACCGAATAACAGGACCAATGTATCAGCTAATTTTAAT TGACGCTGCTTGGGGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MHQPTTMTSNRGNFSFSRLMELLNGRWHKRASYAFLVIVAAHWAEHLSQAFQVYSLNWKLSEANGVLGMFFPWLISSEWL HYSYAIVMLVGLIVLRPAFQGRSRIWWNIALGLQVWHHFEHFLLLLQALLGTTFFGSPTRTSILQLFYARMELHLFYNIV VFLPMMVAMFYHVLPPIGEKTTPTCSCAWHQKPAV
Sequences:
>Translated_195_residues MHQPTTMTSNRGNFSFSRLMELLNGRWHKRASYAFLVIVAAHWAEHLSQAFQVYSLNWKLSEANGVLGMFFPWLISSEWL HYSYAIVMLVGLIVLRPAFQGRSRIWWNIALGLQVWHHFEHFLLLLQALLGTTFFGSPTRTSILQLFYARMELHLFYNIV VFLPMMVAMFYHVLPPIGEKTTPTCSCAWHQKPAV >Mature_195_residues MHQPTTMTSNRGNFSFSRLMELLNGRWHKRASYAFLVIVAAHWAEHLSQAFQVYSLNWKLSEANGVLGMFFPWLISSEWL HYSYAIVMLVGLIVLRPAFQGRSRIWWNIALGLQVWHHFEHFLLLLQALLGTTFFGSPTRTSILQLFYARMELHLFYNIV VFLPMMVAMFYHVLPPIGEKTTPTCSCAWHQKPAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22689; Mature: 22689
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQPTTMTSNRGNFSFSRLMELLNGRWHKRASYAFLVIVAAHWAEHLSQAFQVYSLNWKL CCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE SEANGVLGMFFPWLISSEWLHYSYAIVMLVGLIVLRPAFQGRSRIWWNIALGLQVWHHFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH HFLLLLQALLGTTFFGSPTRTSILQLFYARMELHLFYNIVVFLPMMVAMFYHVLPPIGEK HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TTPTCSCAWHQKPAV CCCCCEECCCCCCCC >Mature Secondary Structure MHQPTTMTSNRGNFSFSRLMELLNGRWHKRASYAFLVIVAAHWAEHLSQAFQVYSLNWKL CCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE SEANGVLGMFFPWLISSEWLHYSYAIVMLVGLIVLRPAFQGRSRIWWNIALGLQVWHHFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH HFLLLLQALLGTTFFGSPTRTSILQLFYARMELHLFYNIVVFLPMMVAMFYHVLPPIGEK HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TTPTCSCAWHQKPAV CCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA