| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897392
Identifier: 159897392
GI number: 159897392
Start: 976275
End: 978704
Strand: Reverse
Name: 159897392
Synonym: Haur_0863
Alternate gene names: NA
Gene position: 978704-976275 (Counterclockwise)
Preceding gene: 159897393
Following gene: 159897388
Centisome position: 15.42
GC content: 53.0
Gene sequence:
>2430_bases ATGAGAGTTTTGGAATTAACTATGCAGCGTTCTTTGATCCTTGGCTTATTAATAATGATGCTTGGCGGCGCAACGCTGCC CTTCGTGGTGCACGCCAGCCCGCAACAACCGCAACCCAGCCAACAGCCCACGCATGGGCTATCATCGCTTGATGGTGGGG TGCAAGGCTTTTTGCAACGCCAAAACAGCAGCCTTGCCAAGCTTGATATCGATGGTCAGCCAGCCAGCCAGATCATCGAG GGCATGGCGGCCTATTACAATATCGAGGCGCGAATTGTATTGGCCTTGTTGGAAACCACCTCGCAACTGATTAGCAACCC AACCTTGCCAACCACCGCCACCGAACAGCCATTTTTAGCTGGCCCCAAAGGCTTTTTGAGCCAAATCGATTGGGCCGCGA AGGAGATTCGGGTTGGGCTTGGCCCCTATGATAGTGCGTTGGTACTGAATTTCAGCGATGGCACGCAACAAAAACTCAAT CCCAATGATGATCCGCATGCGCTGACGGTTAAGCGTTTTTTAGCGTTCGAGCGCGATCAAGCGACATGGCAGCAATTAGT CGCCCGCTATAGCAAGGTTTACCACGATCTATTTCAAAACGAGCCAGTTGTCGCTCCCAGCACGCCGCCAGTTAGCACAG GCTTTTTGAGCATTCCATGGGAGCAGGGTGCTCGTATGGTGCATTCATCACATTTTGATCATACCTATCCCATGGTCGAT AGCGGCGGCGATGGCAACGACGTGATGATCAATTATCAAGGCAAAAGTGGGCTTTCCTACAATAGCCACGATGGCCATGA TTATTATTTTCCTGATTTGCCCTATGGTACGCCGATTGTAGCCGCCGCGCCTGGCTGGGCCTATGCTCGCACAACCCGCG GCTTGGGCGTGCTGATTCAACATGCTGGCGAGGCCGCTGGCTATGAAACGGTCTATTGGCATCTTGATGATTTTGCCCCA AGCTTCAAGGGCTTTATCGATGCCGCTAAACCACGTTGGGTCGAGCGCGGCGAATTGCTCGGCTGGAGTGGGGCAACCGG TTTTACCACGGGCGCTCCTCACTTGCATTTCGAAGTTCGACACAATGGCAATCAAGTTGATCCCTATGGTTGGTATGGCC CTGGCGCTGATCCATGCACCAATTATGTCAAATGCGAAGCCAGTGTTTGGCTTTGGAATGATAGCGTGCCTTGGAGCCGA CCTGATGGCCCAGCCCCGACCGATACCACGCCACCCAGCGCCTTGTTGACGATTAATCCAGCTGAAGATTTGGCCTTGGT CGCTCATTTCGAAAACAACCCCTTACCAGCGGTTGGCCCAATGGCCGCTAGCGATCAACTTAGCTATAGCAGTGGTAAGT TTGGTCAGGCAGTCAAGGTGGGCGATGGCGCATTGACCTATCCAGCTAGCCCAACGCTTACCCTCAATCAAGGTACGTTG GCATTATGGGTGAATGTACCCAAAACATGGCCTAGCTCACGTACAGGCCGCCATTATTTGCTGGCCGCCTCGCAAAACCC AGTTGATCCCGATAAAATCTATCGCAACACCTTGGCGCTACGCCACGAACAAACTGAGCAAGCGATCTGGACATTTTGGA CGGTCGATCAAGCAGGTCAAGAGCATAGTTTGAGCGTGCCCGATACACTCAACGCAGGTTGGCATCACTTCGCAATTAGT TGGGATCAAACGACTGGCAATAAGCGTTTGTTGATCAATGGGATGTTGGTCAATGAGGCGAGCAAAGTCAGCTTGCCCAG CGAAGTTGGCGAAGATTTAAATGTAGGCCGCTGGACAATTGGCGCTGGCATCAGCAATGTGGCAATTGACGAATTGCTGA GCTACAAACGCCAATTAGCTGCTGATGAAATTTATCGGCTGGCCACCAGCGAACAAGCCCTCGCGGCCAGCAGCACCAGC ACCGATCAACACGATCTACTGATCTTAACTCCAGCGCTCGATAATGGTGGTGGCGTAATCAAAGCTCAGCTTGGCATCAA CGGCATTTACGCTGCACCGATGACCTATTATCGCGCCTATCGCTGGACGTTACCTAACGTTGAAGGTAGCTACACCATCA GCGTGCGGCTAACTGATCGCATGGGCAATACCACCACGCTCAGCCAAACAATCAGCATCGATCATCCGCCCCAAGCCAGC GTCAATATTCGCGATATTAATGATTTGGGTGCAACCTTGGTGCTTTCGGCAACCGATGCTAATCAACCGTTGGCAATGGC CTTGAGTGCCTACCCCAGCCCTAGCTTCAAGCAATGGGAGCAGTTCAGCATCGAACGTCAATGGCAGTGGAATCCAATCA CCGCGCGGCGGGTCTACGTTTGGTTCCGCGATGCCAACGGCAACGAGCGCGGCCCGATTGTGGCTGGCCCAGACCTCTTC CGCGCCTATCTGCCCCGAATTGAACGCTAA
Upstream 100 bases:
>100_bases GGTGGGCTGGACCAAACCGAATAACAGGACCAATGTATCAGCTAATTTTAATTGACGCTGCTTGGGGGGCATGCTACCAT ACGGCTGGCAAACGATGTAG
Downstream 100 bases:
>100_bases CACCGTTTTGATCCACGAAGAACACGAAGGGATTCAGGGATCAGAGGTCAGAAAGATGATATTTTCAAGCTGGCCCCTGA CCTCTGATCCCTGAATCCTG
Product: peptidase M23B
Products: NA
Alternate protein names: Peptidase M; M23B Family Peptidase
Number of amino acids: Translated: 809; Mature: 809
Protein sequence:
>809_residues MRVLELTMQRSLILGLLIMMLGGATLPFVVHASPQQPQPSQQPTHGLSSLDGGVQGFLQRQNSSLAKLDIDGQPASQIIE GMAAYYNIEARIVLALLETTSQLISNPTLPTTATEQPFLAGPKGFLSQIDWAAKEIRVGLGPYDSALVLNFSDGTQQKLN PNDDPHALTVKRFLAFERDQATWQQLVARYSKVYHDLFQNEPVVAPSTPPVSTGFLSIPWEQGARMVHSSHFDHTYPMVD SGGDGNDVMINYQGKSGLSYNSHDGHDYYFPDLPYGTPIVAAAPGWAYARTTRGLGVLIQHAGEAAGYETVYWHLDDFAP SFKGFIDAAKPRWVERGELLGWSGATGFTTGAPHLHFEVRHNGNQVDPYGWYGPGADPCTNYVKCEASVWLWNDSVPWSR PDGPAPTDTTPPSALLTINPAEDLALVAHFENNPLPAVGPMAASDQLSYSSGKFGQAVKVGDGALTYPASPTLTLNQGTL ALWVNVPKTWPSSRTGRHYLLAASQNPVDPDKIYRNTLALRHEQTEQAIWTFWTVDQAGQEHSLSVPDTLNAGWHHFAIS WDQTTGNKRLLINGMLVNEASKVSLPSEVGEDLNVGRWTIGAGISNVAIDELLSYKRQLAADEIYRLATSEQALAASSTS TDQHDLLILTPALDNGGGVIKAQLGINGIYAAPMTYYRAYRWTLPNVEGSYTISVRLTDRMGNTTTLSQTISIDHPPQAS VNIRDINDLGATLVLSATDANQPLAMALSAYPSPSFKQWEQFSIERQWQWNPITARRVYVWFRDANGNERGPIVAGPDLF RAYLPRIER
Sequences:
>Translated_809_residues MRVLELTMQRSLILGLLIMMLGGATLPFVVHASPQQPQPSQQPTHGLSSLDGGVQGFLQRQNSSLAKLDIDGQPASQIIE GMAAYYNIEARIVLALLETTSQLISNPTLPTTATEQPFLAGPKGFLSQIDWAAKEIRVGLGPYDSALVLNFSDGTQQKLN PNDDPHALTVKRFLAFERDQATWQQLVARYSKVYHDLFQNEPVVAPSTPPVSTGFLSIPWEQGARMVHSSHFDHTYPMVD SGGDGNDVMINYQGKSGLSYNSHDGHDYYFPDLPYGTPIVAAAPGWAYARTTRGLGVLIQHAGEAAGYETVYWHLDDFAP SFKGFIDAAKPRWVERGELLGWSGATGFTTGAPHLHFEVRHNGNQVDPYGWYGPGADPCTNYVKCEASVWLWNDSVPWSR PDGPAPTDTTPPSALLTINPAEDLALVAHFENNPLPAVGPMAASDQLSYSSGKFGQAVKVGDGALTYPASPTLTLNQGTL ALWVNVPKTWPSSRTGRHYLLAASQNPVDPDKIYRNTLALRHEQTEQAIWTFWTVDQAGQEHSLSVPDTLNAGWHHFAIS WDQTTGNKRLLINGMLVNEASKVSLPSEVGEDLNVGRWTIGAGISNVAIDELLSYKRQLAADEIYRLATSEQALAASSTS TDQHDLLILTPALDNGGGVIKAQLGINGIYAAPMTYYRAYRWTLPNVEGSYTISVRLTDRMGNTTTLSQTISIDHPPQAS VNIRDINDLGATLVLSATDANQPLAMALSAYPSPSFKQWEQFSIERQWQWNPITARRVYVWFRDANGNERGPIVAGPDLF RAYLPRIER >Mature_809_residues MRVLELTMQRSLILGLLIMMLGGATLPFVVHASPQQPQPSQQPTHGLSSLDGGVQGFLQRQNSSLAKLDIDGQPASQIIE GMAAYYNIEARIVLALLETTSQLISNPTLPTTATEQPFLAGPKGFLSQIDWAAKEIRVGLGPYDSALVLNFSDGTQQKLN PNDDPHALTVKRFLAFERDQATWQQLVARYSKVYHDLFQNEPVVAPSTPPVSTGFLSIPWEQGARMVHSSHFDHTYPMVD SGGDGNDVMINYQGKSGLSYNSHDGHDYYFPDLPYGTPIVAAAPGWAYARTTRGLGVLIQHAGEAAGYETVYWHLDDFAP SFKGFIDAAKPRWVERGELLGWSGATGFTTGAPHLHFEVRHNGNQVDPYGWYGPGADPCTNYVKCEASVWLWNDSVPWSR PDGPAPTDTTPPSALLTINPAEDLALVAHFENNPLPAVGPMAASDQLSYSSGKFGQAVKVGDGALTYPASPTLTLNQGTL ALWVNVPKTWPSSRTGRHYLLAASQNPVDPDKIYRNTLALRHEQTEQAIWTFWTVDQAGQEHSLSVPDTLNAGWHHFAIS WDQTTGNKRLLINGMLVNEASKVSLPSEVGEDLNVGRWTIGAGISNVAIDELLSYKRQLAADEIYRLATSEQALAASSTS TDQHDLLILTPALDNGGGVIKAQLGINGIYAAPMTYYRAYRWTLPNVEGSYTISVRLTDRMGNTTTLSQTISIDHPPQAS VNIRDINDLGATLVLSATDANQPLAMALSAYPSPSFKQWEQFSIERQWQWNPITARRVYVWFRDANGNERGPIVAGPDLF RAYLPRIER
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88716; Mature: 88716
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLELTMQRSLILGLLIMMLGGATLPFVVHASPQQPQPSQQPTHGLSSLDGGVQGFLQR CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHCHHHHHHHHH QNSSLAKLDIDGQPASQIIEGMAAYYNIEARIVLALLETTSQLISNPTLPTTATEQPFLA CCCCEEEEEECCCCHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCC GPKGFLSQIDWAAKEIRVGLGPYDSALVLNFSDGTQQKLNPNDDPHALTVKRFLAFERDQ CCHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCH ATWQQLVARYSKVYHDLFQNEPVVAPSTPPVSTGFLSIPWEQGARMVHSSHFDHTYPMVD HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEECCHHHCCHHHHHCCCCCCCCEEE SGGDGNDVMINYQGKSGLSYNSHDGHDYYFPDLPYGTPIVAAAPGWAYARTTRGLGVLIQ CCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCHHHHHCCCCEEEEE HAGEAAGYETVYWHLDDFAPSFKGFIDAAKPRWVERGELLGWSGATGFTTGAPHLHFEVR CCCCCCCCEEEEEEEHHCCCHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCEEEEEEE HNGNQVDPYGWYGPGADPCTNYVKCEASVWLWNDSVPWSRPDGPAPTDTTPPSALLTINP CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECC AEDLALVAHFENNPLPAVGPMAASDQLSYSSGKFGQAVKVGDGALTYPASPTLTLNQGTL CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEECCCEE ALWVNVPKTWPSSRTGRHYLLAASQNPVDPDKIYRNTLALRHEQTEQAIWTFWTVDQAGQ EEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC EHSLSVPDTLNAGWHHFAISWDQTTGNKRLLINGMLVNEASKVSLPSEVGEDLNVGRWTI CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCEEEE GAGISNVAIDELLSYKRQLAADEIYRLATSEQALAASSTSTDQHDLLILTPALDNGGGVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCCCCCEE KAQLGINGIYAAPMTYYRAYRWTLPNVEGSYTISVRLTDRMGNTTTLSQTISIDHPPQAS EEECCCCEEEECCHHHHHEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCE VNIRDINDLGATLVLSATDANQPLAMALSAYPSPSFKQWEQFSIERQWQWNPITARRVYV EEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCEEECCCEEEEEEEE WFRDANGNERGPIVAGPDLFRAYLPRIER EEECCCCCCCCCEEECHHHHHHHHHCCCC >Mature Secondary Structure MRVLELTMQRSLILGLLIMMLGGATLPFVVHASPQQPQPSQQPTHGLSSLDGGVQGFLQR CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHCHHHHHHHHH QNSSLAKLDIDGQPASQIIEGMAAYYNIEARIVLALLETTSQLISNPTLPTTATEQPFLA CCCCEEEEEECCCCHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCC GPKGFLSQIDWAAKEIRVGLGPYDSALVLNFSDGTQQKLNPNDDPHALTVKRFLAFERDQ CCHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCH ATWQQLVARYSKVYHDLFQNEPVVAPSTPPVSTGFLSIPWEQGARMVHSSHFDHTYPMVD HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEECCHHHCCHHHHHCCCCCCCCEEE SGGDGNDVMINYQGKSGLSYNSHDGHDYYFPDLPYGTPIVAAAPGWAYARTTRGLGVLIQ CCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCHHHHHCCCCEEEEE HAGEAAGYETVYWHLDDFAPSFKGFIDAAKPRWVERGELLGWSGATGFTTGAPHLHFEVR CCCCCCCCEEEEEEEHHCCCHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCEEEEEEE HNGNQVDPYGWYGPGADPCTNYVKCEASVWLWNDSVPWSRPDGPAPTDTTPPSALLTINP CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECC AEDLALVAHFENNPLPAVGPMAASDQLSYSSGKFGQAVKVGDGALTYPASPTLTLNQGTL CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEECCCEE ALWVNVPKTWPSSRTGRHYLLAASQNPVDPDKIYRNTLALRHEQTEQAIWTFWTVDQAGQ EEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC EHSLSVPDTLNAGWHHFAISWDQTTGNKRLLINGMLVNEASKVSLPSEVGEDLNVGRWTI CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCEEEE GAGISNVAIDELLSYKRQLAADEIYRLATSEQALAASSTSTDQHDLLILTPALDNGGGVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEECCCCCCCEE KAQLGINGIYAAPMTYYRAYRWTLPNVEGSYTISVRLTDRMGNTTTLSQTISIDHPPQAS EEECCCCEEEECCHHHHHEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCE VNIRDINDLGATLVLSATDANQPLAMALSAYPSPSFKQWEQFSIERQWQWNPITARRVYV EEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCEEECCCEEEEEEEE WFRDANGNERGPIVAGPDLFRAYLPRIER EEECCCCCCCCCEEECHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA