| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897364
Identifier: 159897364
GI number: 159897364
Start: 945188
End: 945589
Strand: Reverse
Name: 159897364
Synonym: Haur_0835
Alternate gene names: NA
Gene position: 945589-945188 (Counterclockwise)
Preceding gene: 159897368
Following gene: 159897363
Centisome position: 14.9
GC content: 47.01
Gene sequence:
>402_bases ATGAGCACAACTGCGAAGGCAATATTTAGCATTTTAGAATGGGATGAAAAATCGTTTCATGAGCAAGCAGGCGAAGGCAA AATGACTCGTGCCCATGTGCGCTATCGCTATGAAGGCGATTTAGCTGGCGAAAGCACGGTTGAATATTTAATGGCTTACC CTGAAGTTGGCGATGCCAGTTATGTTGGCCTACAGCGTTTTGTTGGCACGCTGGCGGGTAAAACTGGTAGTTTTGTGTTG CAACATATCGGCACTGCCAATCAGGTCGATGTTTTTGATCAGATTGAGGTTGTAGCTGGCTCAGCTACCGGCGAATTAGC AGGTTTGCGCGGCCATGGCAAACTGGCGATCAGCGGCCATGCCGAGGGTTATCCATTTGCAATTGAATATGAATTTGTTT AA
Upstream 100 bases:
>100_bases CGCAAATGTTCATCCCGCATCACGCATCCTTTTTTCCTGCTTTACATTTGGCTTAAGCTTGGTTATAGTATTAGCACAAA CGTTTTACTTGGAGAATAGA
Downstream 100 bases:
>100_bases TTACTTGCAACCTTGCTGAACCACGCTGCGTACTGTGTTCCAGAAGGATTGATATTCAATCAAAAGCAGTGCCTTGCATA GTTCTTTTGGCAAGGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSTTAKAIFSILEWDEKSFHEQAGEGKMTRAHVRYRYEGDLAGESTVEYLMAYPEVGDASYVGLQRFVGTLAGKTGSFVL QHIGTANQVDVFDQIEVVAGSATGELAGLRGHGKLAISGHAEGYPFAIEYEFV
Sequences:
>Translated_133_residues MSTTAKAIFSILEWDEKSFHEQAGEGKMTRAHVRYRYEGDLAGESTVEYLMAYPEVGDASYVGLQRFVGTLAGKTGSFVL QHIGTANQVDVFDQIEVVAGSATGELAGLRGHGKLAISGHAEGYPFAIEYEFV >Mature_132_residues STTAKAIFSILEWDEKSFHEQAGEGKMTRAHVRYRYEGDLAGESTVEYLMAYPEVGDASYVGLQRFVGTLAGKTGSFVLQ HIGTANQVDVFDQIEVVAGSATGELAGLRGHGKLAISGHAEGYPFAIEYEFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14410; Mature: 14279
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTAKAIFSILEWDEKSFHEQAGEGKMTRAHVRYRYEGDLAGESTVEYLMAYPEVGDAS CCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCH YVGLQRFVGTLAGKTGSFVLQHIGTANQVDVFDQIEVVAGSATGELAGLRGHGKLAISGH HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHEEEEECCCCCCEEEECCCCEEEECCC AEGYPFAIEYEFV CCCCCEEEEEEEC >Mature Secondary Structure STTAKAIFSILEWDEKSFHEQAGEGKMTRAHVRYRYEGDLAGESTVEYLMAYPEVGDAS CHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCH YVGLQRFVGTLAGKTGSFVLQHIGTANQVDVFDQIEVVAGSATGELAGLRGHGKLAISGH HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHEEEEECCCCCCEEEECCCCEEEECCC AEGYPFAIEYEFV CCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA