| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897334
Identifier: 159897334
GI number: 159897334
Start: 909770
End: 910546
Strand: Reverse
Name: 159897334
Synonym: Haur_0805
Alternate gene names: NA
Gene position: 910546-909770 (Counterclockwise)
Preceding gene: 159897335
Following gene: 159897333
Centisome position: 14.35
GC content: 48.65
Gene sequence:
>777_bases ATGAGTTTTTGGCAAATCTGGGGTTGGGGTCTGGCGGTGGTAATGATTCCATTAACCTTGGCGTGGTTGTGGAGTGTCAA AATTACCAATGCCAGCATTGTGGATATCTGTTGGGGCATGTGTTTTGTGGCCTTGACCTGGTGGTATTTTAGCCAAGCTC AGGGCGATGCTCAACGCCGTTTGATCATCAGCAGTTTGGTGACAATTTGGGGCTTGCGTTTATCAATTTACATTGGTTGG CGTAATTGGGGCAAGCCTGAAGATTATCGTTATGTTGAGTTTCGTCAGCGCTATGGAGCTGAACGCTATTGGTGGTTTAG CTTTTTCCAAGTGTTTTTGCTGCAAGGCGTATTGGCGTTGCTGATCTCGTTGACCTTACTTGGTGCCCAAATCGGCCCAA AAAGCTGGAATTGGCTCGATTATCTAGCAATTGGGGTTTGGCTGATTGGCTTTGGTTTTGAGGCGATTGGCGATTGGCAG ATGGCACGGTTCAAGGCCAATCCGGCCAACAAAGGCCACGTTATGCGCTCTGGCTTATGGCGCTACACCCGCCACCCCAA TTATTTTGGCGATGCGACGGTGTGGTGGGGTTATGCGCTCTTTGCGATTGCCGCTGGTAGCTATTGGCAAATTATCGGTG CCTTGCTTATGACCTGGCTGATTATTCGAATTTCAGGTGTGCTGCTGTTAGAACGCACAATGATCAAAACTAAGCCGCAG TATGCCGATTACATTGCTAAAACCAGCGCCTTCTTGCCGTGGTTTCCCAAAAGCTAA
Upstream 100 bases:
>100_bases CCCAATCGGCTTTGATGCTATGTTGCAAGTTGCGCCCTATCGTTTACGAGTGCATTTGGCTGGTTATGATATTTGGGTGC GTTAGCGCTGGGAGTTTCGC
Downstream 100 bases:
>100_bases ATAAATGACGGAGCAGAGCTAACGTTTTGATCCACGAAGGACACGAAGCGCACGAAGAGAGTAGGCTATAGGCTTTTGGC TTTTCGAAATCATTGTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSFWQIWGWGLAVVMIPLTLAWLWSVKITNASIVDICWGMCFVALTWWYFSQAQGDAQRRLIISSLVTIWGLRLSIYIGW RNWGKPEDYRYVEFRQRYGAERYWWFSFFQVFLLQGVLALLISLTLLGAQIGPKSWNWLDYLAIGVWLIGFGFEAIGDWQ MARFKANPANKGHVMRSGLWRYTRHPNYFGDATVWWGYALFAIAAGSYWQIIGALLMTWLIIRISGVLLLERTMIKTKPQ YADYIAKTSAFLPWFPKS
Sequences:
>Translated_258_residues MSFWQIWGWGLAVVMIPLTLAWLWSVKITNASIVDICWGMCFVALTWWYFSQAQGDAQRRLIISSLVTIWGLRLSIYIGW RNWGKPEDYRYVEFRQRYGAERYWWFSFFQVFLLQGVLALLISLTLLGAQIGPKSWNWLDYLAIGVWLIGFGFEAIGDWQ MARFKANPANKGHVMRSGLWRYTRHPNYFGDATVWWGYALFAIAAGSYWQIIGALLMTWLIIRISGVLLLERTMIKTKPQ YADYIAKTSAFLPWFPKS >Mature_257_residues SFWQIWGWGLAVVMIPLTLAWLWSVKITNASIVDICWGMCFVALTWWYFSQAQGDAQRRLIISSLVTIWGLRLSIYIGWR NWGKPEDYRYVEFRQRYGAERYWWFSFFQVFLLQGVLALLISLTLLGAQIGPKSWNWLDYLAIGVWLIGFGFEAIGDWQM ARFKANPANKGHVMRSGLWRYTRHPNYFGDATVWWGYALFAIAAGSYWQIIGALLMTWLIIRISGVLLLERTMIKTKPQY ADYIAKTSAFLPWFPKS
Specific function: Unknown
COG id: COG3752
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281365853, Length=241, Percent_Identity=30.2904564315353, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI28574404, Length=241, Percent_Identity=30.2904564315353, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI21355723, Length=241, Percent_Identity=30.2904564315353, Blast_Score=105, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30173; Mature: 30041
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50244 S5A_REDUCTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFWQIWGWGLAVVMIPLTLAWLWSVKITNASIVDICWGMCFVALTWWYFSQAQGDAQRR CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LIISSLVTIWGLRLSIYIGWRNWGKPEDYRYVEFRQRYGAERYWWFSFFQVFLLQGVLAL HHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LISLTLLGAQIGPKSWNWLDYLAIGVWLIGFGFEAIGDWQMARFKANPANKGHVMRSGLW HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHCCHHHHHEECCCCCCCHHHHHHHH RYTRHPNYFGDATVWWGYALFAIAAGSYWQIIGALLMTWLIIRISGVLLLERTMIKTKPQ HHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH YADYIAKTSAFLPWFPKS HHHHHHHHCCCCCCCCCC >Mature Secondary Structure SFWQIWGWGLAVVMIPLTLAWLWSVKITNASIVDICWGMCFVALTWWYFSQAQGDAQRR CCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LIISSLVTIWGLRLSIYIGWRNWGKPEDYRYVEFRQRYGAERYWWFSFFQVFLLQGVLAL HHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LISLTLLGAQIGPKSWNWLDYLAIGVWLIGFGFEAIGDWQMARFKANPANKGHVMRSGLW HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHCCHHHHHEECCCCCCCHHHHHHHH RYTRHPNYFGDATVWWGYALFAIAAGSYWQIIGALLMTWLIIRISGVLLLERTMIKTKPQ HHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH YADYIAKTSAFLPWFPKS HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA