Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is yqkD [H]
Identifier: 159897231
GI number: 159897231
Start: 807753
End: 808637
Strand: Direct
Name: yqkD [H]
Synonym: Haur_0702
Alternate gene names: 159897231
Gene position: 807753-808637 (Clockwise)
Preceding gene: 159897230
Following gene: 159897233
Centisome position: 12.73
GC content: 54.12
Gene sequence:
>885_bases ATGAAACGTAAATTATGGCTTGGGGCTGGCCTGAGTGCCGCCGCCAGTGCACTTGCTGGCATCGCGGCCTATGCCGCCCA TCGTTTAAGTGGCCCAACTGCCGCGCTCAAACGTGAAACGCTGTTTGCTTTTACGCCGTTTGAAACCGGGGTTGATTGGG AAGAAGTTCGGTTTAATTCGGTCGATGGCTTGCAAATTCGAGCATGGTGGCTTGGCCGCCCTGAAAGCAAGCGGGTCGTG ATTGGCTGCCATGGTCATCGGGGCCGCAAAGACGAGTTGCTTGGCATTGGTTCAGGCTTGTGGCGAGCAGGCATGAATGT GCTAATTTTCGATTTTCGCGGGCGTGGCGAGAGCGATGATTCAATTTGTTCGTTGGCCTATCACGAGGTTGGCGATTTGC ATGGCGCGATCAAGTATGTTGAAGCACGCTTGCCCGAAGCGCAAATTGGGGTGATTGGCTATTCAATGGGTGCGGCGGTC AGCCTGTTAGGCAGCGCCGATCAGCCAGCGGTTAAGGCTGTCGTTGCTGATAGTAGCTTTGCCGAAATGGCCAATTTGGT TGATTTTGCTTTGGCCAATCGGCGTTTGCCGCCTCGCCCATTGCGAGCTTTAGCCGACCAGATTACTGCCCAACGTTATG GCTATCGCTTCGAGGCCGTGCGGCCAATCGAGGCCTTGATTCGCTATGGGCAACGGCCATTGCTGGTTATTCATTGCACT GGTGATACGGTGATTCCCGTGGTTGATGCCTATGATTTGTATGCCGCCGCCCAAGGCCCGAAAGAACTGTGGATTGTTGA AGACATGCCTCATTGCGGAGCGTATTTCGCTGATCGCCCAGCCTATGTTAAACGAGTCGCCGAGTTTTTCGAGCGCTATT TGTGA
Upstream 100 bases:
>100_bases TCAATGGCGTGCCGATGACTGCCTATCAACCGCACCATCTGCGGCCTGGCGACCGGATTCGGATTGGTGATGTTGAAATG GTTTTTAGTATCGAGTAGTT
Downstream 100 bases:
>100_bases CGAGGTGCTAGGTTTCAGGGGCTAGGGGCCAGAAATTGAGGAATTTAGCATTACTTTTTCTGACCCCTGACAACTAGCCC CTGACCCCTTGCTCACTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNSVDGLQIRAWWLGRPESKRVV IGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDDSICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAV SLLGSADQPAVKAVVADSSFAEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL
Sequences:
>Translated_294_residues MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNSVDGLQIRAWWLGRPESKRVV IGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDDSICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAV SLLGSADQPAVKAVVADSSFAEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL >Mature_294_residues MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNSVDGLQIRAWWLGRPESKRVV IGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDDSICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAV SLLGSADQPAVKAVVADSSFAEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510965, Length=243, Percent_Identity=29.2181069958848, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 32308; Mature: 32308
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNS CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEECCCCCCCCHHHHEECC VDGLQIRAWWLGRPESKRVVIGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDD CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCHHHHCCCEEEEEEECCCCCCCC SICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAVSLLGSADQPAVKAVVADSSF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEECCCHH AEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCEEEEEEC GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL CCEEEEEECHHHHHHHCCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNS CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEECCCCCCCCHHHHEECC VDGLQIRAWWLGRPESKRVVIGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDD CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCHHHHCCCEEEEEEECCCCCCCC SICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAVSLLGSADQPAVKAVVADSSF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEECCCHH AEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCEEEEEEC GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL CCEEEEEECHHHHHHHCCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]