Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yqkD [H]

Identifier: 159897231

GI number: 159897231

Start: 807753

End: 808637

Strand: Direct

Name: yqkD [H]

Synonym: Haur_0702

Alternate gene names: 159897231

Gene position: 807753-808637 (Clockwise)

Preceding gene: 159897230

Following gene: 159897233

Centisome position: 12.73

GC content: 54.12

Gene sequence:

>885_bases
ATGAAACGTAAATTATGGCTTGGGGCTGGCCTGAGTGCCGCCGCCAGTGCACTTGCTGGCATCGCGGCCTATGCCGCCCA
TCGTTTAAGTGGCCCAACTGCCGCGCTCAAACGTGAAACGCTGTTTGCTTTTACGCCGTTTGAAACCGGGGTTGATTGGG
AAGAAGTTCGGTTTAATTCGGTCGATGGCTTGCAAATTCGAGCATGGTGGCTTGGCCGCCCTGAAAGCAAGCGGGTCGTG
ATTGGCTGCCATGGTCATCGGGGCCGCAAAGACGAGTTGCTTGGCATTGGTTCAGGCTTGTGGCGAGCAGGCATGAATGT
GCTAATTTTCGATTTTCGCGGGCGTGGCGAGAGCGATGATTCAATTTGTTCGTTGGCCTATCACGAGGTTGGCGATTTGC
ATGGCGCGATCAAGTATGTTGAAGCACGCTTGCCCGAAGCGCAAATTGGGGTGATTGGCTATTCAATGGGTGCGGCGGTC
AGCCTGTTAGGCAGCGCCGATCAGCCAGCGGTTAAGGCTGTCGTTGCTGATAGTAGCTTTGCCGAAATGGCCAATTTGGT
TGATTTTGCTTTGGCCAATCGGCGTTTGCCGCCTCGCCCATTGCGAGCTTTAGCCGACCAGATTACTGCCCAACGTTATG
GCTATCGCTTCGAGGCCGTGCGGCCAATCGAGGCCTTGATTCGCTATGGGCAACGGCCATTGCTGGTTATTCATTGCACT
GGTGATACGGTGATTCCCGTGGTTGATGCCTATGATTTGTATGCCGCCGCCCAAGGCCCGAAAGAACTGTGGATTGTTGA
AGACATGCCTCATTGCGGAGCGTATTTCGCTGATCGCCCAGCCTATGTTAAACGAGTCGCCGAGTTTTTCGAGCGCTATT
TGTGA

Upstream 100 bases:

>100_bases
TCAATGGCGTGCCGATGACTGCCTATCAACCGCACCATCTGCGGCCTGGCGACCGGATTCGGATTGGTGATGTTGAAATG
GTTTTTAGTATCGAGTAGTT

Downstream 100 bases:

>100_bases
CGAGGTGCTAGGTTTCAGGGGCTAGGGGCCAGAAATTGAGGAATTTAGCATTACTTTTTCTGACCCCTGACAACTAGCCC
CTGACCCCTTGCTCACTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNSVDGLQIRAWWLGRPESKRVV
IGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDDSICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAV
SLLGSADQPAVKAVVADSSFAEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT
GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL

Sequences:

>Translated_294_residues
MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNSVDGLQIRAWWLGRPESKRVV
IGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDDSICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAV
SLLGSADQPAVKAVVADSSFAEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT
GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL
>Mature_294_residues
MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNSVDGLQIRAWWLGRPESKRVV
IGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDDSICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAV
SLLGSADQPAVKAVVADSSFAEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT
GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510965, Length=243, Percent_Identity=29.2181069958848, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 32308; Mature: 32308

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNS
CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEECCCCCCCCHHHHEECC
VDGLQIRAWWLGRPESKRVVIGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDD
CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCHHHHCCCEEEEEEECCCCCCCC
SICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAVSLLGSADQPAVKAVVADSSF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEECCCHH
AEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCEEEEEEC
GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL
CCEEEEEECHHHHHHHCCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRKLWLGAGLSAAASALAGIAAYAAHRLSGPTAALKRETLFAFTPFETGVDWEEVRFNS
CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEECCCCCCCCHHHHEECC
VDGLQIRAWWLGRPESKRVVIGCHGHRGRKDELLGIGSGLWRAGMNVLIFDFRGRGESDD
CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCHHHHCCCEEEEEEECCCCCCCC
SICSLAYHEVGDLHGAIKYVEARLPEAQIGVIGYSMGAAVSLLGSADQPAVKAVVADSSF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEECCCHH
AEMANLVDFALANRRLPPRPLRALADQITAQRYGYRFEAVRPIEALIRYGQRPLLVIHCT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCCCCCEEEEEEC
GDTVIPVVDAYDLYAAAQGPKELWIVEDMPHCGAYFADRPAYVKRVAEFFERYL
CCEEEEEECHHHHHHHCCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]