Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897175
Identifier: 159897175
GI number: 159897175
Start: 744697
End: 746262
Strand: Direct
Name: 159897175
Synonym: Haur_0646
Alternate gene names: NA
Gene position: 744697-746262 (Clockwise)
Preceding gene: 159897174
Following gene: 159897177
Centisome position: 11.73
GC content: 41.83
Gene sequence:
>1566_bases ATGGTATCGTACCATCGTGTCCGTATGCTCTTCGCATTGATCCTGCTTTTCAGTTTATGCAGCACCGCTCCTGCGTCTTC TAGCCAAGCAACATCCCAAGCACTTTCCCATGCCGTTATTGATGCTAGCGGGGTTCTTGATAACTGGCAATCACTTGCCA TAGGGTCAGATGGATTAGGCTTAATTGCGTATTGGGATGAAACAGCTAAAGTACTCAAGGTTGCCCATTGTAATGATGTC GCTTGCCGCACCGCAACTATTACTCCTCTTGTTACAACGACTACCGAGTTCGGGAGTATTGAACTTACCATTGGAAGGGA TGGTTTAGGGAAAATTATCTATAACGTGGGCGGGCAAATATTCTTAGCCTTTTGCCAAAATATTAGTTGTACGAGTATTC AGACTAAACCTATTCACAGTGGTGGAAATAGCCAGCTTCTTATAGGAAGTGATAGTAACCCAATCATTTTTAGTACGACT GGTTCTAGTCCTGACAATTATCAGATCAAGGTATCACATTGTGATGATCCACAATGTCAAGCTATCACTACAACAAAACT CACCGATACCTTAAAAACATCTTCTCCTTTAGTTGCTGCTATCGGTAGTGATGGATTTCCACTTATTTTATACTATGATA ATGATCTGCTTCAACACATGCTTATTCACTGTTCCGATGTCGCTTGCCAACAAACAACGACTTCAGCGCTTCCTATAGCT ACCTATCAAGCAAACACCGATAGTGATATGACCATAGGTAGTGATGGATTTCCAATCATTACCTATAAAACTATTCAATT TGATCAATTAGGTATCATTCACTGTGAAAATATTCTTTGTACCACCTATACAAATGTGTATCATGATGATTTTTGGCTGG GTACCCATCCATCAGTTATTATCAATAGTGATGGATTACCGCTCGTGAGTTACTCTGTTGATCGTAATCAACGCAGGGAT CTTTATATTTCCCGTTGTCTTGACCTTGCCTGTAACGATATAACGACCCATATTTTAGATAAAACAACGTGGATAGGGAC GCAAGATATGGCGCTCGGAAATGATGGCTTGGTGTTGATCGCCTATCATGATCTCTCTCGAGCACAATTACGCGTTATCC ACTGTAAAGATATTGCCTGTAGTGAAGATGGGGTTAATCTTTTTGCTCAGTATGCACCGATGCTGATGCAAACACCAACA TCGATGGTTGTTCCGATCAATGCAACAGCTATTCCTGATCAAGCAGTCACCACCCTTGGCCAAGTCTTCTTTACGACGTC GATTTCAATTCCTCAGCCCATTCCTAGCGGTGGGAGATATGTTCTTGCGGGGAATGCACAAGGTACAGCACCAAGCATTG TGGATGATAAAGTGGTTCTCAAAGCAGGAAACCAAACGATTTTTGAATTTGAGTATGGTGGTACGGGAACTCCTAATCCT ACTTTAGTTGAGGTTCCGAATGCCATTATTGAATCACATATTGGACAAACCATTACTATAGAATTCCGTGATGTGTATGG TGGACGAATCCAAGCTTCAACGATGTATCTGGTTTGGATTCCCTAG
Upstream 100 bases:
>100_bases CGTATCACTTGACGAATATTCAAGAGTCATTACACTAGAGATCTATCATCACTGAGAGATGCTATCTCACGTTTATCACA CACTTTTGAGGGAGGTAACT
Downstream 100 bases:
>100_bases CTAAATACTATCGTTATCACATAACTAATGACCCCATACTTTTTTAGGTATGGGGTCATTAGTTATTTTTGCATGTGCCG TTTGTTTCGCAACAGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MVSYHRVRMLFALILLFSLCSTAPASSSQATSQALSHAVIDASGVLDNWQSLAIGSDGLGLIAYWDETAKVLKVAHCNDV ACRTATITPLVTTTTEFGSIELTIGRDGLGKIIYNVGGQIFLAFCQNISCTSIQTKPIHSGGNSQLLIGSDSNPIIFSTT GSSPDNYQIKVSHCDDPQCQAITTTKLTDTLKTSSPLVAAIGSDGFPLILYYDNDLLQHMLIHCSDVACQQTTTSALPIA TYQANTDSDMTIGSDGFPIITYKTIQFDQLGIIHCENILCTTYTNVYHDDFWLGTHPSVIINSDGLPLVSYSVDRNQRRD LYISRCLDLACNDITTHILDKTTWIGTQDMALGNDGLVLIAYHDLSRAQLRVIHCKDIACSEDGVNLFAQYAPMLMQTPT SMVVPINATAIPDQAVTTLGQVFFTTSISIPQPIPSGGRYVLAGNAQGTAPSIVDDKVVLKAGNQTIFEFEYGGTGTPNP TLVEVPNAIIESHIGQTITIEFRDVYGGRIQASTMYLVWIP
Sequences:
>Translated_521_residues MVSYHRVRMLFALILLFSLCSTAPASSSQATSQALSHAVIDASGVLDNWQSLAIGSDGLGLIAYWDETAKVLKVAHCNDV ACRTATITPLVTTTTEFGSIELTIGRDGLGKIIYNVGGQIFLAFCQNISCTSIQTKPIHSGGNSQLLIGSDSNPIIFSTT GSSPDNYQIKVSHCDDPQCQAITTTKLTDTLKTSSPLVAAIGSDGFPLILYYDNDLLQHMLIHCSDVACQQTTTSALPIA TYQANTDSDMTIGSDGFPIITYKTIQFDQLGIIHCENILCTTYTNVYHDDFWLGTHPSVIINSDGLPLVSYSVDRNQRRD LYISRCLDLACNDITTHILDKTTWIGTQDMALGNDGLVLIAYHDLSRAQLRVIHCKDIACSEDGVNLFAQYAPMLMQTPT SMVVPINATAIPDQAVTTLGQVFFTTSISIPQPIPSGGRYVLAGNAQGTAPSIVDDKVVLKAGNQTIFEFEYGGTGTPNP TLVEVPNAIIESHIGQTITIEFRDVYGGRIQASTMYLVWIP >Mature_521_residues MVSYHRVRMLFALILLFSLCSTAPASSSQATSQALSHAVIDASGVLDNWQSLAIGSDGLGLIAYWDETAKVLKVAHCNDV ACRTATITPLVTTTTEFGSIELTIGRDGLGKIIYNVGGQIFLAFCQNISCTSIQTKPIHSGGNSQLLIGSDSNPIIFSTT GSSPDNYQIKVSHCDDPQCQAITTTKLTDTLKTSSPLVAAIGSDGFPLILYYDNDLLQHMLIHCSDVACQQTTTSALPIA TYQANTDSDMTIGSDGFPIITYKTIQFDQLGIIHCENILCTTYTNVYHDDFWLGTHPSVIINSDGLPLVSYSVDRNQRRD LYISRCLDLACNDITTHILDKTTWIGTQDMALGNDGLVLIAYHDLSRAQLRVIHCKDIACSEDGVNLFAQYAPMLMQTPT SMVVPINATAIPDQAVTTLGQVFFTTSISIPQPIPSGGRYVLAGNAQGTAPSIVDDKVVLKAGNQTIFEFEYGGTGTPNP TLVEVPNAIIESHIGQTITIEFRDVYGGRIQASTMYLVWIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56327; Mature: 56327
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSYHRVRMLFALILLFSLCSTAPASSSQATSQALSHAVIDASGVLDNWQSLAIGSDGLG CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEECCCCCE LIAYWDETAKVLKVAHCNDVACRTATITPLVTTTTEFGSIELTIGRDGLGKIIYNVGGQI EEEEECCCCEEEEEECCCCCEEEEEEECEEEEEEECCCEEEEEECCCCHHHHHHHCCCEE FLAFCQNISCTSIQTKPIHSGGNSQLLIGSDSNPIIFSTTGSSPDNYQIKVSHCDDPQCQ EEEHHCCCCCCEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCE AITTTKLTDTLKTSSPLVAAIGSDGFPLILYYDNDLLQHMLIHCSDVACQQTTTSALPIA EEEEEEHHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHCCCHHCCCCCCCCEEE TYQANTDSDMTIGSDGFPIITYKTIQFDQLGIIHCENILCTTYTNVYHDDFWLGTHPSVI EEECCCCCCEEECCCCCEEEEEEEEEECCCCEEEECCEEEEEECCCEECCEEECCCCEEE INSDGLPLVSYSVDRNQRRDLYISRCLDLACNDITTHILDKTTWIGTQDMALGNDGLVLI ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEE AYHDLSRAQLRVIHCKDIACSEDGVNLFAQYAPMLMQTPTSMVVPINATAIPDQAVTTLG EEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH QVFFTTSISIPQPIPSGGRYVLAGNAQGTAPSIVDDKVVLKAGNQTIFEFEYGGTGTPNP HEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCC TLVEVPNAIIESHIGQTITIEFRDVYGGRIQASTMYLVWIP EEEECCHHHHHHHCCCEEEEEEEECCCCEEEEEEEEEEEEC >Mature Secondary Structure MVSYHRVRMLFALILLFSLCSTAPASSSQATSQALSHAVIDASGVLDNWQSLAIGSDGLG CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEECCCCCE LIAYWDETAKVLKVAHCNDVACRTATITPLVTTTTEFGSIELTIGRDGLGKIIYNVGGQI EEEEECCCCEEEEEECCCCCEEEEEEECEEEEEEECCCEEEEEECCCCHHHHHHHCCCEE FLAFCQNISCTSIQTKPIHSGGNSQLLIGSDSNPIIFSTTGSSPDNYQIKVSHCDDPQCQ EEEHHCCCCCCEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCE AITTTKLTDTLKTSSPLVAAIGSDGFPLILYYDNDLLQHMLIHCSDVACQQTTTSALPIA EEEEEEHHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHCCCHHCCCCCCCCEEE TYQANTDSDMTIGSDGFPIITYKTIQFDQLGIIHCENILCTTYTNVYHDDFWLGTHPSVI EEECCCCCCEEECCCCCEEEEEEEEEECCCCEEEECCEEEEEECCCEECCEEECCCCEEE INSDGLPLVSYSVDRNQRRDLYISRCLDLACNDITTHILDKTTWIGTQDMALGNDGLVLI ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCEEEE AYHDLSRAQLRVIHCKDIACSEDGVNLFAQYAPMLMQTPTSMVVPINATAIPDQAVTTLG EEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH QVFFTTSISIPQPIPSGGRYVLAGNAQGTAPSIVDDKVVLKAGNQTIFEFEYGGTGTPNP HEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCC TLVEVPNAIIESHIGQTITIEFRDVYGGRIQASTMYLVWIP EEEECCHHHHHHHCCCEEEEEEEECCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA