Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is pabA [H]
Identifier: 159897126
GI number: 159897126
Start: 689327
End: 689926
Strand: Direct
Name: pabA [H]
Synonym: Haur_0597
Alternate gene names: 159897126
Gene position: 689327-689926 (Clockwise)
Preceding gene: 159897125
Following gene: 159897127
Centisome position: 10.86
GC content: 50.67
Gene sequence:
>600_bases ATGGCCGTCTTGCTACTCGATAACTACGATTCCTTTACCTATAATTTGTATCAATATTTCTGCGAACTTGGCGCAGAGGT GGTGGTCAAGCGCAACGATGAAATTGAAGTCGATGATATTCGCCACATGGAAGCCATTGACCGGATTGTAATTTCGCCTG GACCATGTACGCCTGCCGAAGCCGGCATTAGCGTGCCGCTGATTCGCGAATTGTGTATGGAATACCCAATTTTAGGCGTT TGTCTGGGACATCAATCGATTGGGGCCGCCTTTGGCGGGCGAGTGATTCGCGCTCCCCAATTGCGCCACGGCAAAACCTC ACCGATCACTCACTTGAATGTTGGGATTTTCGCTGGTGTGCCTTCACCCTTCACCGCCACCCGCTATCACTCATTGATTG TCGAGGAATCCAGCTTGCCTAGTGATCTTGAGGCTACCGCTTGGAGTGATGATGGCTTGATTATGGGTTTGCGCCACCGC ACCTTGCCAATCGAAGGCGTGCAATTCCACCCCGAATCGATTATGACTGAGCATGGCAAAGTGTTACTTGCTAACTTCTT GAGCATTGCTAAACCAGAGTTGGCCGAGGTTAGGGGTTAG
Upstream 100 bases:
>100_bases GCTCGAAGATGTTAGCGCTGAGATCTTGTTTAATAGTCCAATTCCTGTTTTACTTGTCCAAAATACCAGCGATTTCTAAA CCGCAATCAAGGAGTTTGCT
Downstream 100 bases:
>100_bases GGGTTAGGGATCAGGGGTCAGAGGTCAGGAATGGATTCCGTGAATCTGTGGCTAAAAACAGCTTTGCGTTTTTTGCGTCC TTCGCGGTTCCGTGCTTCGT
Product: glutamine amidotransferase of anthranilate synthase
Products: NA
Alternate protein names: ADC synthase [H]
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MAVLLLDNYDSFTYNLYQYFCELGAEVVVKRNDEIEVDDIRHMEAIDRIVISPGPCTPAEAGISVPLIRELCMEYPILGV CLGHQSIGAAFGGRVIRAPQLRHGKTSPITHLNVGIFAGVPSPFTATRYHSLIVEESSLPSDLEATAWSDDGLIMGLRHR TLPIEGVQFHPESIMTEHGKVLLANFLSIAKPELAEVRG
Sequences:
>Translated_199_residues MAVLLLDNYDSFTYNLYQYFCELGAEVVVKRNDEIEVDDIRHMEAIDRIVISPGPCTPAEAGISVPLIRELCMEYPILGV CLGHQSIGAAFGGRVIRAPQLRHGKTSPITHLNVGIFAGVPSPFTATRYHSLIVEESSLPSDLEATAWSDDGLIMGLRHR TLPIEGVQFHPESIMTEHGKVLLANFLSIAKPELAEVRG >Mature_198_residues AVLLLDNYDSFTYNLYQYFCELGAEVVVKRNDEIEVDDIRHMEAIDRIVISPGPCTPAEAGISVPLIRELCMEYPILGVC LGHQSIGAAFGGRVIRAPQLRHGKTSPITHLNVGIFAGVPSPFTATRYHSLIVEESSLPSDLEATAWSDDGLIMGLRHRT LPIEGVQFHPESIMTEHGKVLLANFLSIAKPELAEVRG
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI18105007, Length=165, Percent_Identity=29.6969696969697, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1789760, Length=185, Percent_Identity=62.1621621621622, Blast_Score=244, Evalue=2e-66, Organism=Escherichia coli, GI1787517, Length=194, Percent_Identity=41.2371134020619, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1786215, Length=142, Percent_Identity=27.4647887323944, Blast_Score=62, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322638, Length=189, Percent_Identity=50.2645502645503, Blast_Score=195, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6324361, Length=214, Percent_Identity=33.1775700934579, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 21865; Mature: 21734
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLLLDNYDSFTYNLYQYFCELGAEVVVKRNDEIEVDDIRHMEAIDRIVISPGPCTPAE CEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHEEECCCCCCCCC AGISVPLIRELCMEYPILGVCLGHQSIGAAFGGRVIRAPQLRHGKTSPITHLNVGIFAGV CCCCCHHHHHHHHHCCEEEEEECCHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEEEECC PSPFTATRYHSLIVEESSLPSDLEATAWSDDGLIMGLRHRTLPIEGVQFHPESIMTEHGK CCCCCHHHHHEEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEECCHHHHHHCCH VLLANFLSIAKPELAEVRG HHHHHHHHHCCCHHHHCCC >Mature Secondary Structure AVLLLDNYDSFTYNLYQYFCELGAEVVVKRNDEIEVDDIRHMEAIDRIVISPGPCTPAE EEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHEEECCCCCCCCC AGISVPLIRELCMEYPILGVCLGHQSIGAAFGGRVIRAPQLRHGKTSPITHLNVGIFAGV CCCCCHHHHHHHHHCCEEEEEECCHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEEEECC PSPFTATRYHSLIVEESSLPSDLEATAWSDDGLIMGLRHRTLPIEGVQFHPESIMTEHGK CCCCCHHHHHEEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEECCHHHHHHCCH VLLANFLSIAKPELAEVRG HHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3894673 [H]