Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897125
Identifier: 159897125
GI number: 159897125
Start: 688475
End: 689305
Strand: Direct
Name: 159897125
Synonym: Haur_0596
Alternate gene names: NA
Gene position: 688475-689305 (Clockwise)
Preceding gene: 159897124
Following gene: 159897126
Centisome position: 10.85
GC content: 53.07
Gene sequence:
>831_bases ATGAAGCCTTTTAATTTGATGATTTACCTTGATGGTTCCTCGGCAGCGCGACGCATGGTGGCCTATCTTGCGCCATTAGC CCGTAAATCGCATGTCAAAACGACCTTTTTGGTCGATGAAGCCCATCAAGATGAAGCCGAAATGTATTTTTTCAACGCTG AGCAATTATTGCAAAGCGATCAAGCGCCGACCCGCACGATTCGCGGAGCCACGCCAGAACGGGCGATTGTGCTCGAAACT CGTGCTAGCCAACCAGATTTGGTGGCGTTTGGGCCGTTGCGCAAGGAAGGTTGGCGACGATGGCTGGGTCAATCGGCGAT TGGTTCGTTGGCTCGGCGTTTAACCTGCTCGATGTTATTGATGCAAGGTCGCCCGAATGAGCTGCGCCGCGCCTTGGTTT GCGCTGCTGGTGGCCCGGCTACGCTACACGATGCCCAAATGACGGCCTCAATTATCGAACCCCTTGGCGGCCAAGTAACA ATTTTGCATATTGTGTCGCAACTATCGCTGACCTACAAGCCCGAGGAGCGCGACCCTGAGCGGCTCGCCGATTTGGTGAT GGAAAAGCAGGGCGAGGTGGCGCGTAATATTGCTGCCGCCAAAACCATTTTGACCGATCGCGGCATTACCACCACCGTGC GGATTCGCGCTGGCATGGTGCTTGAAGAAATTCAAGAGGAACTCAAAACGGGCGGTTACGATCTCTTGGTGATAGGTGCG CATCGGGCGCGAACGCCACTTGATCGGGTCTTGCTCGAAGATGTTAGCGCTGAGATCTTGTTTAATAGTCCAATTCCTGT TTTACTTGTCCAAAATACCAGCGATTTCTAA
Upstream 100 bases:
>100_bases CTTGCTTGATCGGGTAGTCAACGATACGCCGATGTTGGTTACCTTTATGGTGGTGATGGTCGTGACCCCGATTCTGCTGT TATTTATCTAGGATCAACCT
Downstream 100 bases:
>100_bases ACCGCAATCAAGGAGTTTGCTATGGCCGTCTTGCTACTCGATAACTACGATTCCTTTACCTATAATTTGTATCAATATTT CTGCGAACTTGGCGCAGAGG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKPFNLMIYLDGSSAARRMVAYLAPLARKSHVKTTFLVDEAHQDEAEMYFFNAEQLLQSDQAPTRTIRGATPERAIVLET RASQPDLVAFGPLRKEGWRRWLGQSAIGSLARRLTCSMLLMQGRPNELRRALVCAAGGPATLHDAQMTASIIEPLGGQVT ILHIVSQLSLTYKPEERDPERLADLVMEKQGEVARNIAAAKTILTDRGITTTVRIRAGMVLEEIQEELKTGGYDLLVIGA HRARTPLDRVLLEDVSAEILFNSPIPVLLVQNTSDF
Sequences:
>Translated_276_residues MKPFNLMIYLDGSSAARRMVAYLAPLARKSHVKTTFLVDEAHQDEAEMYFFNAEQLLQSDQAPTRTIRGATPERAIVLET RASQPDLVAFGPLRKEGWRRWLGQSAIGSLARRLTCSMLLMQGRPNELRRALVCAAGGPATLHDAQMTASIIEPLGGQVT ILHIVSQLSLTYKPEERDPERLADLVMEKQGEVARNIAAAKTILTDRGITTTVRIRAGMVLEEIQEELKTGGYDLLVIGA HRARTPLDRVLLEDVSAEILFNSPIPVLLVQNTSDF >Mature_276_residues MKPFNLMIYLDGSSAARRMVAYLAPLARKSHVKTTFLVDEAHQDEAEMYFFNAEQLLQSDQAPTRTIRGATPERAIVLET RASQPDLVAFGPLRKEGWRRWLGQSAIGSLARRLTCSMLLMQGRPNELRRALVCAAGGPATLHDAQMTASIIEPLGGQVT ILHIVSQLSLTYKPEERDPERLADLVMEKQGEVARNIAAAKTILTDRGITTTVRIRAGMVLEEIQEELKTGGYDLLVIGA HRARTPLDRVLLEDVSAEILFNSPIPVLLVQNTSDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30571; Mature: 30571
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFNLMIYLDGSSAARRMVAYLAPLARKSHVKTTFLVDEAHQDEAEMYFFNAEQLLQSD CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECHHHHHCCC QAPTRTIRGATPERAIVLETRASQPDLVAFGPLRKEGWRRWLGQSAIGSLARRLTCSMLL CCCCHHCCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHH MQGRPNELRRALVCAAGGPATLHDAQMTASIIEPLGGQVTILHIVSQLSLTYKPEERDPE HCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHEEECCCCCCHH RLADLVMEKQGEVARNIAAAKTILTDRGITTTVRIRAGMVLEEIQEELKTGGYDLLVIGA HHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEECC HRARTPLDRVLLEDVSAEILFNSPIPVLLVQNTSDF CCCCCHHHHHHHHHCCCEEEECCCCCEEEECCCCCC >Mature Secondary Structure MKPFNLMIYLDGSSAARRMVAYLAPLARKSHVKTTFLVDEAHQDEAEMYFFNAEQLLQSD CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECHHHHHCCC QAPTRTIRGATPERAIVLETRASQPDLVAFGPLRKEGWRRWLGQSAIGSLARRLTCSMLL CCCCHHCCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHH MQGRPNELRRALVCAAGGPATLHDAQMTASIIEPLGGQVTILHIVSQLSLTYKPEERDPE HCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHEEECCCCCCHH RLADLVMEKQGEVARNIAAAKTILTDRGITTTVRIRAGMVLEEIQEELKTGGYDLLVIGA HHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEECC HRARTPLDRVLLEDVSAEILFNSPIPVLLVQNTSDF CCCCCHHHHHHHHHCCCEEEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA