Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897102
Identifier: 159897102
GI number: 159897102
Start: 660581
End: 661138
Strand: Direct
Name: 159897102
Synonym: Haur_0573
Alternate gene names: NA
Gene position: 660581-661138 (Clockwise)
Preceding gene: 159897073
Following gene: 159897111
Centisome position: 10.41
GC content: 51.97
Gene sequence:
>558_bases ATGGCTAAATTGCACCCTGAGCTAACCCCTGAATTACAGGCATTTATCGCGCAACAACCACTATTTTTTGTGGCGAGTGC TCCCTTGGCTGCCGATGGCCATGTCAATCTTTCGCCCAAAGGCTTGGATTGCTTGCGCATTCACTCGCCACAACAGGTTG CTTACTTGGATTTAACTGGCAGTGGCAATGAAACCTCAGCGCATATGTTGGAAAATGGTCGGATTACCTTGATGTTTTGT GCTTTTGTGGGAGCACCACGGATTTTGCGTTTGTATGGCCGTGGGCGGGTGATTCTGCCAACGATGGCTGAATGGGAACC CGAGCTAGCGCAGTTTCCGCACTATCCATGCATTCGCCAAATTGTGTTGGTTGCGGTCGAGCGGGTGCAAACATCGTGTG GTTTTGGCGTGCCCTTGATGGAGTTGGTTGGGCAGCGCGATACAGCCTTACGTTGGGCTGAGGCCAAGGGCGAACAAGGC CTAGCAACGTATCGCTCCGAGAAAAATCTCGCAAGTATTGATGGCTTGCCAACGCACTTGGCGAGTGAGGCTGGTTAA
Upstream 100 bases:
>100_bases GTTTGCAAAAGCTGAAATTGGTGCTGGCGAGGAGGGAATGATTTGCCGATCGCGTTACAATTGAAGTGCTAGCAGGATCG ATTGCTTGATGGAGAACCCA
Downstream 100 bases:
>100_bases TCCAGTACCAACGGAGGGAGCCACATACCAAGTGATGTGGCTCCCTTTATTGCTAGGAATGTTGCTCAATAAATTCGCTT ACTTTGGTAAACCATTGTTT
Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Signal Transduction Histidine Kinase; Pyridoxamine-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase Family
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAKLHPELTPELQAFIAQQPLFFVASAPLAADGHVNLSPKGLDCLRIHSPQQVAYLDLTGSGNETSAHMLENGRITLMFC AFVGAPRILRLYGRGRVILPTMAEWEPELAQFPHYPCIRQIVLVAVERVQTSCGFGVPLMELVGQRDTALRWAEAKGEQG LATYRSEKNLASIDGLPTHLASEAG
Sequences:
>Translated_185_residues MAKLHPELTPELQAFIAQQPLFFVASAPLAADGHVNLSPKGLDCLRIHSPQQVAYLDLTGSGNETSAHMLENGRITLMFC AFVGAPRILRLYGRGRVILPTMAEWEPELAQFPHYPCIRQIVLVAVERVQTSCGFGVPLMELVGQRDTALRWAEAKGEQG LATYRSEKNLASIDGLPTHLASEAG >Mature_184_residues AKLHPELTPELQAFIAQQPLFFVASAPLAADGHVNLSPKGLDCLRIHSPQQVAYLDLTGSGNETSAHMLENGRITLMFCA FVGAPRILRLYGRGRVILPTMAEWEPELAQFPHYPCIRQIVLVAVERVQTSCGFGVPLMELVGQRDTALRWAEAKGEQGL ATYRSEKNLASIDGLPTHLASEAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20204; Mature: 20072
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLHPELTPELQAFIAQQPLFFVASAPLAADGHVNLSPKGLDCLRIHSPQQVAYLDLTG CCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCEEEEECCCCEEEEEEEEC SGNETSAHMLENGRITLMFCAFVGAPRILRLYGRGRVILPTMAEWEPELAQFPHYPCIRQ CCCCCHHHHHCCCCEEEEEEHHHCCCCEEEECCCCCEEECCHHHCCCHHHHCCCCHHHHH IVLVAVERVQTSCGFGVPLMELVGQRDTALRWAEAKGEQGLATYRSEKNLASIDGLPTHL HHHHHHHHHHHHCCCCCHHHHHCCCCCHHEEEHHCCCCCCHHHHHCCCCCHHCCCCCHHH ASEAG HCCCC >Mature Secondary Structure AKLHPELTPELQAFIAQQPLFFVASAPLAADGHVNLSPKGLDCLRIHSPQQVAYLDLTG CCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCEEEEECCCCEEEEEEEEC SGNETSAHMLENGRITLMFCAFVGAPRILRLYGRGRVILPTMAEWEPELAQFPHYPCIRQ CCCCCHHHHHCCCCEEEEEEHHHCCCCEEEECCCCCEEECCHHHCCCHHHHCCCCHHHHH IVLVAVERVQTSCGFGVPLMELVGQRDTALRWAEAKGEQGLATYRSEKNLASIDGLPTHL HHHHHHHHHHHHCCCCCHHHHHCCCCCHHEEEHHCCCCCCHHHHHCCCCCHHCCCCCHHH ASEAG HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA