Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897067

Identifier: 159897067

GI number: 159897067

Start: 623751

End: 624389

Strand: Direct

Name: 159897067

Synonym: Haur_0538

Alternate gene names: NA

Gene position: 623751-624389 (Clockwise)

Preceding gene: 159897066

Following gene: 159897068

Centisome position: 9.83

GC content: 44.6

Gene sequence:

>639_bases
GTGTTTGATAAAAGCCCGAAGCTTCAGCTAGATTTCTTCGATAATGCGGTGATTATGACCCGCCGTGAGCCATCTGGTTG
GTCATCATACCCAGTCGATGTTAGTGAGGTTGCAAAGGTATTAAGCGGTATCCCCCAATCATCGGGATTGCTCCCTCAAA
ATACCTTAGGCTATGGAAGCTATAAAGGCAGTTCCTTCTACTGCATGTATATTCCACCAAAATCCATCACGATAGAGCTT
GCCAATAATGATCGGTTAACGATTCCCATTCCACCGCTCGTTTGGCGTGGTTGGAAACAAAACTATCAGATTTGGGCATT
AGCCACTGAAGCCTATCCTTTAGCGTCAACACCCTTATTTATGGCTCCCTTCCCTAATGTGTACCCGAATGCGATGATTT
GCTGGGGTGATAGTGATGATCGTTTGCCTGCTGGCCCAAGCACGATGCAGGCAATGCTTGACCTCTTTTTGATAGGCAGT
CGTTTCAATACCCATTTGGTTGGTGGTAAGAGCATGCGTTCATCTGGCAATATTATCAATCTGTACCATAGGATTAAAGG
TAAGGCTATGTATCCACTTCATGATTTATGTGCTACTGATTTAGTTCTTGAAAACGTGTTGGAAGGGGGATTTGCATGA

Upstream 100 bases:

>100_bases
GCTGCGGTCGTACTGGCTAATGATACCCAACGCCCAGCAACCTTAATGGAGTTAGTCAATGCCAACGATGAAGTACCCCA
GACCATATAAGCGAGAAATC

Downstream 100 bases:

>100_bases
TCCCAAACCTTCACCGCTACCATATTGTTACTGAAGCGGAACCATATCCCCCTAATCAGCCAGGCTTGACGTGGCTGATC
GCAGCGAACGGCATCTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFDKSPKLQLDFFDNAVIMTRREPSGWSSYPVDVSEVAKVLSGIPQSSGLLPQNTLGYGSYKGSSFYCMYIPPKSITIEL
ANNDRLTIPIPPLVWRGWKQNYQIWALATEAYPLASTPLFMAPFPNVYPNAMICWGDSDDRLPAGPSTMQAMLDLFLIGS
RFNTHLVGGKSMRSSGNIINLYHRIKGKAMYPLHDLCATDLVLENVLEGGFA

Sequences:

>Translated_212_residues
MFDKSPKLQLDFFDNAVIMTRREPSGWSSYPVDVSEVAKVLSGIPQSSGLLPQNTLGYGSYKGSSFYCMYIPPKSITIEL
ANNDRLTIPIPPLVWRGWKQNYQIWALATEAYPLASTPLFMAPFPNVYPNAMICWGDSDDRLPAGPSTMQAMLDLFLIGS
RFNTHLVGGKSMRSSGNIINLYHRIKGKAMYPLHDLCATDLVLENVLEGGFA
>Mature_212_residues
MFDKSPKLQLDFFDNAVIMTRREPSGWSSYPVDVSEVAKVLSGIPQSSGLLPQNTLGYGSYKGSSFYCMYIPPKSITIEL
ANNDRLTIPIPPLVWRGWKQNYQIWALATEAYPLASTPLFMAPFPNVYPNAMICWGDSDDRLPAGPSTMQAMLDLFLIGS
RFNTHLVGGKSMRSSGNIINLYHRIKGKAMYPLHDLCATDLVLENVLEGGFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23560; Mature: 23560

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKSPKLQLDFFDNAVIMTRREPSGWSSYPVDVSEVAKVLSGIPQSSGLLPQNTLGYGS
CCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
YKGSSFYCMYIPPKSITIELANNDRLTIPIPPLVWRGWKQNYQIWALATEAYPLASTPLF
CCCCEEEEEEECCCCEEEEECCCCEEEEECCHHHHCCCCCCEEEEEEEECCCCCCCCCEE
MAPFPNVYPNAMICWGDSDDRLPAGPSTMQAMLDLFLIGSRFNTHLVGGKSMRSSGNIIN
ECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEE
LYHRIKGKAMYPLHDLCATDLVLENVLEGGFA
EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFDKSPKLQLDFFDNAVIMTRREPSGWSSYPVDVSEVAKVLSGIPQSSGLLPQNTLGYGS
CCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
YKGSSFYCMYIPPKSITIELANNDRLTIPIPPLVWRGWKQNYQIWALATEAYPLASTPLF
CCCCEEEEEEECCCCEEEEECCCCEEEEECCHHHHCCCCCCEEEEEEEECCCCCCCCCEE
MAPFPNVYPNAMICWGDSDDRLPAGPSTMQAMLDLFLIGSRFNTHLVGGKSMRSSGNIIN
ECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEE
LYHRIKGKAMYPLHDLCATDLVLENVLEGGFA
EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA