Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897066
Identifier: 159897066
GI number: 159897066
Start: 622814
End: 623740
Strand: Direct
Name: 159897066
Synonym: Haur_0537
Alternate gene names: NA
Gene position: 622814-623740 (Clockwise)
Preceding gene: 159897065
Following gene: 159897067
Centisome position: 9.81
GC content: 43.69
Gene sequence:
>927_bases TTGACCCCTGCGGGCTTTAGTGATGAAACCATCATTAAAGAATGGAATGATGTACTGCATGGGGTTCGGCTAATGCAGCG TTACGATCCTAGTTATTATGAACAGATTCGCGATGAACCATTGACGTTGGTAAAGGGTAAGTCTTGTTTTATCAGAATGG CATATCTGGTTGAAGATCTTGTTTCCACAACCATGAATTTTCAAGATTATATGGAGTGGAGACAAGAGGACTTCGATCCC TATGATGATGCCGATGATATTGCCAATGATGATCCTGCCCTCTCGGAAAGCTATAGTCTTGATCTGCGATTTGAGATTGC CGGGCAATGGCTTGATGAAACCCCTTTAGCCGTTTTTGGTTTACCGATTCATGCTGGTGAAGCTGGAGATATGTTTCATC TTGCAATGTGGCTTACGCGGTATCCATTTCATACTACACCCTACGATGTTATGCGGTTCGATGGTGATCGCTATTTCGTG AAAGATAAAGAAATTTTTCAAGCGCTGAAAACATTTGACCCTTTGCCTGAGCATATTCATATCCATGGATTAATTCAAGA ATTAAATCGCAAAAAGATCTATGGGTTTGAGCTTGGAACCTTGATTCAATATGCATTGCGCATTACTGGTGATGTGTTTG CCGATGTTTCTATGGCAGAACTGGAAGTTGGTGGATGGGATGACGGCATAGATTGGGCTAACCCTGATATGGTCGCCTCA GTCCAAGATCGTCAACGTCGAGCCGATGCGCTGTGCAGCCAATTCCATGACTTTGCAGCATGGCTTGATCGCAACAATGA ATATGCGATCGATATTTTGCTCAATATTTATGGAGCCGCTGCGGTCGTACTGGCTAATGATACCCAACGCCCAGCAACCT TAATGGAGTTAGTCAATGCCAACGATGAAGTACCCCAGACCATATAA
Upstream 100 bases:
>100_bases AAAAATATAACCGCGAGGAATCAGCACTATGCCTGCACTTAGCCGAATTGCCCGCAAGCGCCGATCAAGATCTGCCATTG GGTTGGTAAAGGTTAGCTCT
Downstream 100 bases:
>100_bases GCGAGAAATCGTGTTTGATAAAAGCCCGAAGCTTCAGCTAGATTTCTTCGATAATGCGGTGATTATGACCCGCCGTGAGC CATCTGGTTGGTCATCATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTPAGFSDETIIKEWNDVLHGVRLMQRYDPSYYEQIRDEPLTLVKGKSCFIRMAYLVEDLVSTTMNFQDYMEWRQEDFDP YDDADDIANDDPALSESYSLDLRFEIAGQWLDETPLAVFGLPIHAGEAGDMFHLAMWLTRYPFHTTPYDVMRFDGDRYFV KDKEIFQALKTFDPLPEHIHIHGLIQELNRKKIYGFELGTLIQYALRITGDVFADVSMAELEVGGWDDGIDWANPDMVAS VQDRQRRADALCSQFHDFAAWLDRNNEYAIDILLNIYGAAAVVLANDTQRPATLMELVNANDEVPQTI
Sequences:
>Translated_308_residues MTPAGFSDETIIKEWNDVLHGVRLMQRYDPSYYEQIRDEPLTLVKGKSCFIRMAYLVEDLVSTTMNFQDYMEWRQEDFDP YDDADDIANDDPALSESYSLDLRFEIAGQWLDETPLAVFGLPIHAGEAGDMFHLAMWLTRYPFHTTPYDVMRFDGDRYFV KDKEIFQALKTFDPLPEHIHIHGLIQELNRKKIYGFELGTLIQYALRITGDVFADVSMAELEVGGWDDGIDWANPDMVAS VQDRQRRADALCSQFHDFAAWLDRNNEYAIDILLNIYGAAAVVLANDTQRPATLMELVNANDEVPQTI >Mature_307_residues TPAGFSDETIIKEWNDVLHGVRLMQRYDPSYYEQIRDEPLTLVKGKSCFIRMAYLVEDLVSTTMNFQDYMEWRQEDFDPY DDADDIANDDPALSESYSLDLRFEIAGQWLDETPLAVFGLPIHAGEAGDMFHLAMWLTRYPFHTTPYDVMRFDGDRYFVK DKEIFQALKTFDPLPEHIHIHGLIQELNRKKIYGFELGTLIQYALRITGDVFADVSMAELEVGGWDDGIDWANPDMVASV QDRQRRADALCSQFHDFAAWLDRNNEYAIDILLNIYGAAAVVLANDTQRPATLMELVNANDEVPQTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35459; Mature: 35328
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAGFSDETIIKEWNDVLHGVRLMQRYDPSYYEQIRDEPLTLVKGKSCFIRMAYLVEDL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH VSTTMNFQDYMEWRQEDFDPYDDADDIANDDPALSESYSLDLRFEIAGQWLDETPLAVFG HHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEE LPIHAGEAGDMFHLAMWLTRYPFHTTPYDVMRFDGDRYFVKDKEIFQALKTFDPLPEHIH CEEECCCCCCHHHHHHHHHHCCCCCCCHHHEEECCCEEEECCHHHHHHHHHCCCCCCHHH IHGLIQELNRKKIYGFELGTLIQYALRITGDVFADVSMAELEVGGWDDGIDWANPDMVAS HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCCEEH VQDRQRRADALCSQFHDFAAWLDRNNEYAIDILLNIYGAAAVVLANDTQRPATLMELVNA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCEEEEEECCCCCHHHHHHHHCC NDEVPQTI CCCCCCCC >Mature Secondary Structure TPAGFSDETIIKEWNDVLHGVRLMQRYDPSYYEQIRDEPLTLVKGKSCFIRMAYLVEDL CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH VSTTMNFQDYMEWRQEDFDPYDDADDIANDDPALSESYSLDLRFEIAGQWLDETPLAVFG HHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEE LPIHAGEAGDMFHLAMWLTRYPFHTTPYDVMRFDGDRYFVKDKEIFQALKTFDPLPEHIH CEEECCCCCCHHHHHHHHHHCCCCCCCHHHEEECCCEEEECCHHHHHHHHHCCCCCCHHH IHGLIQELNRKKIYGFELGTLIQYALRITGDVFADVSMAELEVGGWDDGIDWANPDMVAS HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCCEEH VQDRQRRADALCSQFHDFAAWLDRNNEYAIDILLNIYGAAAVVLANDTQRPATLMELVNA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCEEEEEECCCCCHHHHHHHHCC NDEVPQTI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA