Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is yegI [C]
Identifier: 159897016
GI number: 159897016
Start: 562767
End: 563969
Strand: Direct
Name: yegI [C]
Synonym: Haur_0484
Alternate gene names: 159897016
Gene position: 562767-563969 (Clockwise)
Preceding gene: 159897015
Following gene: 159897019
Centisome position: 8.87
GC content: 37.16
Gene sequence:
>1203_bases ATGATGACTTTTAGCTATCGAACCAAACAGCATATCCATGTTCAACTTGATCAGCTGAATCCGCTTGGTAAGGGTGGCGA AGGTAGTGTCTATTCTGTTATCAATACGCCGAACTACCCTAATCACTGTGCAAAAATTTTTCATCCTAACCGATTAACTG CTGATTTAGAGCGAAAAATTAACTTTATGGTCGATAATCAACCTTCAACTCTCATAAGTACAAATTATCGGATTGCTTGG CCGATTGCTTCGTTATATCACAATAAAAAATTCTATGGTTTTATTATGCCAAAAGCATTTGATAAAAGTATTGGCCTTGA GCGTGTAACTCAACCTCAGATTAGCCTCAAAGGTATTGATACTCAATGGATTAAATATCAGCGCAATGATAAACAAGGGA TGATTAATTGTTTTAAAGTTTGTGTAAATATTGCCTTCATTGTTAACCTTATTCATCAAATGAAAAAATATACCTTTGTT GATCTAAAACCTCAAAATATTTTAGTTAACCTCAATGGTTTTGTATCGATTACCGATATTGATTCGATGCAAGTGTATGA TCCTCAGAAAAATCTGTATTATAAATCTGTAGTTTCTACTGCTGAATACTCGCCACCTGAATATCAAAGCTACTTGAAAA AAGGAGGAAATATCACACAAGAATGGGATAATTTTTCGATGGCAGTAATTTTTTATCAATTAATGACCGGGGTTCACCCG TTTGCCGCAACATTTGGTGGTAAATTTAGTAATTCAACAACAATTGATGATCATATTAGCCAAAGCTTATTTGTATTTGG AGATAATCGGCAGACAATAACGAAATTGCCACCATTACATACATATTATCAGCAAATTCCATTGAATATTCAACAATTAT TTTTACGAGCATTTGATAAACCAGTCAGCCAGCGCCCAACTGCCGAAGAGTGGGGGCAGAATCTATTTGAGTTAGTTTCT AAGGATTCGCATTTGATCGCATCGAACACAGCAGTTGCGGCGCTGGCATTACCAGTAAAATCAGCCTTGAAGCCGGCTGC TCAATCAACAACTGGCCATGTTCAGATGTTCCAATTAACGAAGGCTTCCACTCATAGTCAGGGGTCTCAATCAACGAAAG CTCCACATAAGAGTTATGCTTGGGTTGGTTGGCTGATTGTGCTCGTTTGTATTATTGTGGTGATTGCTGTTGCCAACGCC TAA
Upstream 100 bases:
>100_bases AAAGATATTCTATTGCGAGGGACTACAGGTTTTGCAAATGAGTCAGATGATAAAACCATGATTCTTGGTTTGTGGATCTA GGCATGATATAAGGATTTTA
Downstream 100 bases:
>100_bases AGGCCAATAATGCCGCGCCGACGCAAAAAGGGCAAGATACTTTGTTCAAGTGGGCGATCGGTGCGGATGCCAGCATAGGT TGCGCCATAGCGTTGACATA
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase; WD-40 Repeat-Containing Protein; Von Willebrand Factor Type A; DNA poisomerase Type IA Zn Finger Domain Protein; WD-40 Repeat-Containing Serine/Threonin Protein Kinase; WD-40 Repeat Protein
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MMTFSYRTKQHIHVQLDQLNPLGKGGEGSVYSVINTPNYPNHCAKIFHPNRLTADLERKINFMVDNQPSTLISTNYRIAW PIASLYHNKKFYGFIMPKAFDKSIGLERVTQPQISLKGIDTQWIKYQRNDKQGMINCFKVCVNIAFIVNLIHQMKKYTFV DLKPQNILVNLNGFVSITDIDSMQVYDPQKNLYYKSVVSTAEYSPPEYQSYLKKGGNITQEWDNFSMAVIFYQLMTGVHP FAATFGGKFSNSTTIDDHISQSLFVFGDNRQTITKLPPLHTYYQQIPLNIQQLFLRAFDKPVSQRPTAEEWGQNLFELVS KDSHLIASNTAVAALALPVKSALKPAAQSTTGHVQMFQLTKASTHSQGSQSTKAPHKSYAWVGWLIVLVCIIVVIAVANA
Sequences:
>Translated_400_residues MMTFSYRTKQHIHVQLDQLNPLGKGGEGSVYSVINTPNYPNHCAKIFHPNRLTADLERKINFMVDNQPSTLISTNYRIAW PIASLYHNKKFYGFIMPKAFDKSIGLERVTQPQISLKGIDTQWIKYQRNDKQGMINCFKVCVNIAFIVNLIHQMKKYTFV DLKPQNILVNLNGFVSITDIDSMQVYDPQKNLYYKSVVSTAEYSPPEYQSYLKKGGNITQEWDNFSMAVIFYQLMTGVHP FAATFGGKFSNSTTIDDHISQSLFVFGDNRQTITKLPPLHTYYQQIPLNIQQLFLRAFDKPVSQRPTAEEWGQNLFELVS KDSHLIASNTAVAALALPVKSALKPAAQSTTGHVQMFQLTKASTHSQGSQSTKAPHKSYAWVGWLIVLVCIIVVIAVANA >Mature_400_residues MMTFSYRTKQHIHVQLDQLNPLGKGGEGSVYSVINTPNYPNHCAKIFHPNRLTADLERKINFMVDNQPSTLISTNYRIAW PIASLYHNKKFYGFIMPKAFDKSIGLERVTQPQISLKGIDTQWIKYQRNDKQGMINCFKVCVNIAFIVNLIHQMKKYTFV DLKPQNILVNLNGFVSITDIDSMQVYDPQKNLYYKSVVSTAEYSPPEYQSYLKKGGNITQEWDNFSMAVIFYQLMTGVHP FAATFGGKFSNSTTIDDHISQSLFVFGDNRQTITKLPPLHTYYQQIPLNIQQLFLRAFDKPVSQRPTAEEWGQNLFELVS KDSHLIASNTAVAALALPVKSALKPAAQSTTGHVQMFQLTKASTHSQGSQSTKAPHKSYAWVGWLIVLVCIIVVIAVANA
Specific function: Unknown
COG id: COG4248
COG function: function code R; Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45242; Mature: 45242
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTFSYRTKQHIHVQLDQLNPLGKGGEGSVYSVINTPNYPNHCAKIFHPNRLTADLERKI CCEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCHHHHHCE NFMVDNQPSTLISTNYRIAWPIASLYHNKKFYGFIMPKAFDKSIGLERVTQPQISLKGID EEEECCCCCEEEECCCEEEECHHHHHCCCCEEEEECCHHHCCCCCHHHCCCCCEEEECCC TQWIKYQRNDKQGMINCFKVCVNIAFIVNLIHQMKKYTFVDLKPQNILVNLNGFVSITDI HHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCEEEEEEC DSMQVYDPQKNLYYKSVVSTAEYSPPEYQSYLKKGGNITQEWDNFSMAVIFYQLMTGVHP CCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCH FAATFGGKFSNSTTIDDHISQSLFVFGDNRQTITKLPPLHTYYQQIPLNIQQLFLRAFDK HHHHHCCCCCCCCCCHHHCCCEEEEEECCCCEECCCCCHHHHHHHCCCCHHHHHHHHHCC PVSQRPTAEEWGQNLFELVSKDSHLIASNTAVAALALPVKSALKPAAQSTTGHVQMFQLT CCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCHHHCCCCCCEEEEEEE KASTHSQGSQSTKAPHKSYAWVGWLIVLVCIIVVIAVANA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMTFSYRTKQHIHVQLDQLNPLGKGGEGSVYSVINTPNYPNHCAKIFHPNRLTADLERKI CCEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCHHHHHCE NFMVDNQPSTLISTNYRIAWPIASLYHNKKFYGFIMPKAFDKSIGLERVTQPQISLKGID EEEECCCCCEEEECCCEEEECHHHHHCCCCEEEEECCHHHCCCCCHHHCCCCCEEEECCC TQWIKYQRNDKQGMINCFKVCVNIAFIVNLIHQMKKYTFVDLKPQNILVNLNGFVSITDI HHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCEEEEEEC DSMQVYDPQKNLYYKSVVSTAEYSPPEYQSYLKKGGNITQEWDNFSMAVIFYQLMTGVHP CCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCH FAATFGGKFSNSTTIDDHISQSLFVFGDNRQTITKLPPLHTYYQQIPLNIQQLFLRAFDK HHHHHCCCCCCCCCCHHHCCCEEEEEECCCCEECCCCCHHHHHHHCCCCHHHHHHHHHCC PVSQRPTAEEWGQNLFELVSKDSHLIASNTAVAALALPVKSALKPAAQSTTGHVQMFQLT CCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCHHHCCCCCCEEEEEEE KASTHSQGSQSTKAPHKSYAWVGWLIVLVCIIVVIAVANA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA