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The map label for this gene is 15927838

Identifier: 15927838

GI number: 15927838

Start: 2315921

End: 2316829

Strand: Reverse

Name: 15927838

Synonym: SA2054

Alternate gene names: NA

Gene position: 2316829-2315921 (Counterclockwise)

Preceding gene: 15927841

Following gene: 15927834

Centisome position: 82.31

GC content: 32.89

Gene sequence:

>909_bases
GTGACAGAACAATTTACTATGATTATTTTATTAATTGCGCTTGGTTACTTTTTGAAGCGCATTAATTTTATAAAGGCAAC
AGATAGTCAAGTCATTGCTACATTAGTTCTTAATGTCACACTCCCATCTTTAGTTATTGTGAATTTAAACAGTGCAGAAT
TAAAATTGTCATTCTCCATTTTACCAATTTTAATGATTATATATGGTATTGTGGCGAAAATGATTGCTGTCTGGTTTTTT
AGAAAATATGATAATCACATGCGTGGATCAGTAGGTATGATGACTGGTGCTATGAATATTGGATTGTTTGCATATCCACT
AATTGAAGTGATATGGCCTAAAACGGGGCTTATTTATTTTGGTATGGCTGATATAGGTGGTGCCTTTGTGATGTTTGGAA
TTACTTACTTTGTAGGTAGCTACTTTAGTGAAGGTAGTGATCAATTCGATTTTAAATATTTAGGTAAGAAATTATTACAG
TCAGTGCCACTCGTTACATACATTGTAATGTTTATATTGAATATAAATCACATCCATTTACCACATGTGGCAATCGATTT
CTTTAGCATACTTTCCCATGCAAATATGCCGTTATCAATGATTTTGCTAGGTGTTATGTTGAATTTTACTCTGGAAAGAA
AGTATATACCTGCTACTATTAAATATTTATGTTTGCATTATGGATTAGCATTAGTTGCGGGATTGTTAGTACATGTGTTG
TTACCGGTATCAGATGATATGATTAAGACGACATTGTTGGTCACTTGGATGTTCCCGGTTGGTGTCGCAATTATTTCTTA
TGGTATTCAGTTTAAATATCGAACACTGCCATTTATAGGTATGACGACCAATTTGACAATCATTATTAGTATCATTATTT
TGTACGTGTATCAGGCAGTGTTTGTCTAG

Upstream 100 bases:

>100_bases
CATTTAATGTAGATTATAGCATGAAACAGTAGACTTCTAAAATATCTGTGGAGTATGTTAAAGTTATAAATTATGAAGAT
TATTGAAAGAAGGGATAACA

Downstream 100 bases:

>100_bases
TTTACACATTTGAAAATAAAATCCATTTTAGTATTCGTAGAAAATGAGAGCCCCCTTTACCACAACATGTAAATGCATAT
TGTGAAAAGGGGGCTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Transporter Protein; Efflux Carrier; LOW QUALITY PROTEIN Auxin Efflux Carrier; Auxin Efflux Carrier Family Protein; Transporter Auxin Efflux Carrier Family; Auxin Efflux Carrier Family Transporter; Malonate Efflux Carrier

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFF
RKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYFGMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQ
SVPLVTYIVMFILNINHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVHVL
LPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAVFV

Sequences:

>Translated_302_residues
MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFF
RKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYFGMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQ
SVPLVTYIVMFILNINHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVHVL
LPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAVFV
>Mature_301_residues
TEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFFR
KYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYFGMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQS
VPLVTYIVMFILNINHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVHVLL
PVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAVFV

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34018; Mature: 33887

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCHHEEEHHHH
LPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
GMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVTYIVMFILNINHIHL
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEC
PHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVHVL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAV
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHH
FV
CC
>Mature Secondary Structure 
TEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSI
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCHHEEEHHHH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CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA