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The map label for this gene is rimP

Identifier: 15926848

GI number: 15926848

Start: 1258478

End: 1258945

Strand: Direct

Name: rimP

Synonym: SA1108

Alternate gene names: 15926848

Gene position: 1258478-1258945 (Clockwise)

Preceding gene: 15926847

Following gene: 15926849

Centisome position: 44.71

GC content: 32.69

Gene sequence:

>468_bases
ATGAGTAAAATTACAGAACAAGTAGAAGTGATTGTTCAACCAATTATGGAAGACTTGAATTTTGAACTTGTAGACGTTGA
ATATGTCAAAGAGGGTAGAGATCATTTTCTTAGAATCTCTATTGATAAAGAAGGTGGCGTAGATTTAAATGATTGTACGC
TAGCTTCTGAAAAAATAAGTGAAGCTATGGATGCAAATGATCCTATTCCTGAAATGTATTATTTAGACGTAGCGTCACCT
GGTGCAGAACGTCCAATTAAAAAAGAACAAGATTTCCAAAATGCAATAACTAAACCTGTATTTGTTTCTTTATATGTACC
AATTGAAGGTGAAAAGGAATGGTTAGGCATTTTACAAGAAGTCAATAATGAAACAATTGTAGTACAAGTTAAAATCAAAG
CAAGAACGAAAGATATAGAGATACCGAGAGACAAAATAGCAAAAGCACGTCACGCAGTTATGATTTAA

Upstream 100 bases:

>100_bases
ATAAACTTATGCTATAATTAAGTTGCTTAAAAATTAGTGAACTCAGGCAGAAGAGTGGGAGATTCCCGCTCTTTTCTATT
TGCCAAAAAGGGAGGCCTGT

Downstream 100 bases:

>100_bases
CGTGATGAGGAGGAAAAAACGTGTCAAGTAATGAATTATTATTAGCTACTGAGTATTTAGAAAAAGAAAAGAAGATTCCT
AGAGCAGTATTAATTGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSKITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKEGGVDLNDCTLASEKISEAMDANDPIPEMYYLDVASP
GAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI

Sequences:

>Translated_155_residues
MSKITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKEGGVDLNDCTLASEKISEAMDANDPIPEMYYLDVASP
GAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI
>Mature_154_residues
SKITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKEGGVDLNDCTLASEKISEAMDANDPIPEMYYLDVASPG
AERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=133, Percent_Identity=33.0827067669173, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_STAA1 (A7X1P6)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001441845.1
- ProteinModelPortal:   A7X1P6
- SMR:   A7X1P6
- STRING:   A7X1P6
- EnsemblBacteria:   EBSTAT00000003942
- GeneID:   5559480
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1255
- eggNOG:   COG0779
- GeneTree:   EBGT00050000024884
- HOGENOM:   HBG668072
- OMA:   PYEKIAN
- ProtClustDB:   PRK00092
- BioCyc:   SAUR418127:SAHV_1255-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17627; Mature: 17496

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKEGGVDLNDCTLASEKIS
CCHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
EAMDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQE
HHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHH
VNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI
CCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SKITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKEGGVDLNDCTLASEKIS
CHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
EAMDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQE
HHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHH
VNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI
CCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA