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The map label for this gene is lytN

Identifier: 15926830

GI number: 15926830

Start: 1233582

End: 1234700

Strand: Direct

Name: lytN

Synonym: SA1090

Alternate gene names: 15926830

Gene position: 1233582-1234700 (Clockwise)

Preceding gene: 15926829

Following gene: 15926831

Centisome position: 43.82

GC content: 29.13

Gene sequence:

>1119_bases
ATGAATAAACAACAAAGTAAAGTACGCTATTCAATTAGAAAAGTTAGTATTGGAATTTTGTCAATTTCAATAGGTATGTT
TTTGGCATTGGGTATGTCGAACAAAGCATATGCAGATGAAATTGATAAATCTAAAGATTTTACAAGAGGGTATGAGCAAA
ATGTATTCGCGAAATCAGAGTTAAATGCTAATAAAAATACGACAAAAGACAAAATAAAAAATGAAGGTGCTGTTAAAACA
TCGGACACAAGTTTAAAGTTAGACAACAAATCAGCAATTTCAAACGGAAATGAAATTAATCAAGATATAAAGATTTCAAA
TACTCCGAAAAACTCAAGCCAAGGTAACAATCTAGTTATTAATAACAATGAACCTACTAAAGAAATTAAAATTGCAAACT
TGGAAGCTCAAAATTCTAATCAGAAGAAAACGAATAAAGTTACTAATAATTACTTTGGTTACTACAGTTTTAGAGAAGCT
CCAAAAACACAAATCTATACTGTAAAAAAAGGAGACACACTTAGTGCTATAGCATTAAAATACAAAACTACAGTTTCAAA
TATTCAAAATACAAATAATATAGCAAATCCTAATTTAATATTTATTGGTCAAAAATTAAAAGTGCCAATGACACCATTAG
TAGAACCAAAACCAAAAACAGTGTCTTCAAATAATAAAAGTAATAGTAATAGCAGTACATTAAATTATTTGAAAACATTA
GAGAATAGAGGATGGGATTTCGACGGTAGTTATGGATGGCAATGTTTCGATTTAGTTAATGTATATTGGAATCATCTTTA
TGGTCATGGATTAAAAGGATATGGAGCTAAAGATATACCATATGCAAATAATTTTAATAGTGAAGCTAAAATTTATCACA
ACACACCAACTTTCAAAGCTGAACCTGGGGACTTAGTGGTTTTTAGTGGAAGATTTGGTGGAGGATATGGTCATACAGCT
ATTGTCTTAAATGGTGATTATGATGGAAAATTAATGAAGTTCCAAAGTTTAGATCAAAACTGGAATAATGGTGGATGGCG
TAAAGCAGAGGTTGCACATAAAGTTGTTCATAATTATGAAAATGATATGATTTTTATTAGACCATTTAAAAAAGCATAA

Upstream 100 bases:

>100_bases
TACCTCCTACAATAGCTTTATAAAACAAAGAAAATTTTAATTAAAATATATAGTGCACTACGTTATAATGTTTATATATT
ATTGTAAGGAGTGTTCCATC

Downstream 100 bases:

>100_bases
TTTAAATCGAAGGCAGGACATTGAAATATGAAATTTTCAACTTTAAGTGAAGAAGAATTTACCAACTACACCAAAAAGCA
CTTCAAACATTATACACAGT

Product: LytN protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTRGYEQNVFAKSELNANKNTTKDKIKNEGAVKT
SDTSLKLDNKSAISNGNEINQDIKISNTPKNSSQGNNLVINNNEPTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREA
PKTQIYTVKKGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNSNSSTLNYLKTL
ENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEAKIYHNTPTFKAEPGDLVVFSGRFGGGYGHTA
IVLNGDYDGKLMKFQSLDQNWNNGGWRKAEVAHKVVHNYENDMIFIRPFKKA

Sequences:

>Translated_372_residues
MNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTRGYEQNVFAKSELNANKNTTKDKIKNEGAVKT
SDTSLKLDNKSAISNGNEINQDIKISNTPKNSSQGNNLVINNNEPTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREA
PKTQIYTVKKGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNSNSSTLNYLKTL
ENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEAKIYHNTPTFKAEPGDLVVFSGRFGGGYGHTA
IVLNGDYDGKLMKFQSLDQNWNNGGWRKAEVAHKVVHNYENDMIFIRPFKKA
>Mature_372_residues
MNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTRGYEQNVFAKSELNANKNTTKDKIKNEGAVKT
SDTSLKLDNKSAISNGNEINQDIKISNTPKNSSQGNNLVINNNEPTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREA
PKTQIYTVKKGDTLSAIALKYKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNSNSSTLNYLKTL
ENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEAKIYHNTPTFKAEPGDLVVFSGRFGGGYGHTA
IVLNGDYDGKLMKFQSLDQNWNNGGWRKAEVAHKVVHNYENDMIFIRPFKKA

Specific function: Probably involved in peptidoglycan hydrolysis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase C51 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007921
- InterPro:   IPR005877
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF05257 CHAP; PF01476 LysM; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 41739; Mature: 41739

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50911 CHAP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTRGYEQNVFAKSE
CCCHHHHHHEEEEEEEEEEEEHHHHHHHHCCCCCCHHHHHHHCCHHHHCCHHHCCEEHHH
LNANKNTTKDKIKNEGAVKTSDTSLKLDNKSAISNGNEINQDIKISNTPKNSSQGNNLVI
CCCCCCCCHHHHCCCCCEEECCCEEEECCCHHCCCCCCCCCCEEECCCCCCCCCCCEEEE
NNNEPTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREAPKTQIYTVKKGDTLSAIALK
CCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEE
YKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNSNSSTLNYLKTL
EHHHHHHCCCCCCCCCCCEEEEECEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEAKIYHNTPTFKA
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
EPGDLVVFSGRFGGGYGHTAIVLNGDYDGKLMKFQSLDQNWNNGGWRKAEVAHKVVHNYE
CCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHCCC
NDMIFIRPFKKA
CCEEEEEECCCC
>Mature Secondary Structure
MNKQQSKVRYSIRKVSIGILSISIGMFLALGMSNKAYADEIDKSKDFTRGYEQNVFAKSE
CCCHHHHHHEEEEEEEEEEEEHHHHHHHHCCCCCCHHHHHHHCCHHHHCCHHHCCEEHHH
LNANKNTTKDKIKNEGAVKTSDTSLKLDNKSAISNGNEINQDIKISNTPKNSSQGNNLVI
CCCCCCCCHHHHCCCCCEEECCCEEEECCCHHCCCCCCCCCCEEECCCCCCCCCCCEEEE
NNNEPTKEIKIANLEAQNSNQKKTNKVTNNYFGYYSFREAPKTQIYTVKKGDTLSAIALK
CCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEE
YKTTVSNIQNTNNIANPNLIFIGQKLKVPMTPLVEPKPKTVSSNNKSNSNSSTLNYLKTL
EHHHHHHCCCCCCCCCCCEEEEECEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ENRGWDFDGSYGWQCFDLVNVYWNHLYGHGLKGYGAKDIPYANNFNSEAKIYHNTPTFKA
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
EPGDLVVFSGRFGGGYGHTAIVLNGDYDGKLMKFQSLDQNWNNGGWRKAEVAHKVVHNYE
CCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHCCC
NDMIFIRPFKKA
CCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9931440; 10077832; 12791130 [H]