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The map label for this gene is araB

Identifier: 15926230

GI number: 15926230

Start: 596096

End: 597733

Strand: Direct

Name: araB

Synonym: SA0510

Alternate gene names: 15926230

Gene position: 596096-597733 (Clockwise)

Preceding gene: 15926229

Following gene: 15926231

Centisome position: 21.18

GC content: 32.91

Gene sequence:

>1638_bases
ATGTCGTATAGCATTGGAATTGATTATGGAACTGCTTCAGGCCGTGTGTTTTTAATTAATACAACTAACGGTCAAGTAGT
ATCAAAATTTGTGAAACCATATACACATGGTGTCATTGAAAGTGAATTAAATGGTTTGAAAATACCACATACATATGCAC
TTCAAAATAGTAATGATTATTTAGAAATTATGGAAGAAGGAATATCATATATAGTACGTGAATCAAAAATAGATCCAGTC
AATATAGTAGGTATTGGTATAGACTTTACTTCATCTACTATTATTTTTACTGACGAAAACCTTAACCCGGTACATAATTT
AAAACAATTTAAAAACAATCCACATGCGTATGTGAAACTTTGGAAACATCATGGTGCATATAAAGAAGCAGAGAAATTAT
ATCAAACTGCTATTGAAAATAATAATAAGTGGTTAGGCCATTATGGATATAATGTTAGTAGTGAATGGATGATTCCCAAA
ATAATGGAAGTCATGAATCGAGCACCAGAAATTATGGAAAAAACGGCTTATATTATGGAAGCGGGCGATTGGATTGTAAA
TAAATTAACTAATAAAAATGTACGCTCGAATTGTGGATTAGGTTTCAAAGCATTTTGGGAAGAAGAAACAGGGTTTCATT
ATGATTTATTTGATAAAATAGACCCCAAATTATCAAAAGTAATTCAAGATAAAGTATCTGCACCGGTTGTTAATATTGGT
GAAGTAGTAGGGAAACTGGACGATAAAATGGCACAGAAATTAGGATTATCAAAAGAGACTATGGTAAGTCCTTTTATTAT
TGATGCCCATGCTAGTTTATTAGGTATTGGGTCTGAAAAAGATAAAGAAATGACTATGGTGATGGGAACAAGCACATGCC
ATCTTATGTTAAATGAAAAGCAACATCAAGTGCCAGGTATATCAGGTTCTGTAAAAGGAGCAATTATTCCAGAATTATTT
GCTTATGAAGCGGGGCAATCAGCAGTAGGTGATTTGTTTGAGTATGTCGCTAAGCAAGCACCAAAGTCATATGTAGATGA
AGCAGCAAATAGAAATATGACTGTATTTGAATTAATGAATGAAAAGATAAAACATCAAATGCCAGGTGAAAGTGGGCTCA
TTGCTCTTGATTGGCATAATGGAAATCGAAGTGTATTAAGTGATAGCAATTTAACAGGTTGTATCTTTGGATTAACTTTA
CAAACTAAGCATGAGGATATTTATAGAGCATATTTAGAAGCTACAGCATTTGGTACTAAGATGATTATGCAACAGTATCA
AGATTGGCATATGGAAGTAGAAAAGGTATTTGCATGTGGCGGTATACCTAAAAAGAATGCTGTTATGATGGATATCTATG
CGAATGTACTGAATAAAAAACTAATTGTTATGGATAGTGAGTATGCACCAGCAATAGGCGCAGCAATATTAGGTGCAGTC
AGTGGTGGCGCACATAATTCAATTAATGATGCAGTTGATGCTATGAAAGAGCCAATTTTATACGAAATTAATCCAGAAGC
GGAAAAAGTACAAAGGTATGAAACATTATTTAAAGCTTATAAGGCTTTACATGATATCCATGGTTATAAAAAAGCTAATA
TAATGAAAGATATCCAGAGTTTAAGAGTTGAGGGATAA

Upstream 100 bases:

>100_bases
AAATTTAAGTGATACTTGTAAAATAGAACCTATTATGAGTATGATTTAAGAAAACGCTTGCAAAACTAATAACCGCAACT
AGCGATATGGAGGAAACATG

Downstream 100 bases:

>100_bases
AAAATTTAATTTGACAGTAATTAGCAATAATAAACGCTATAAATTACTAAAATCAATTAATACAACTAGAATTTCCATTT
ACAGAAACATCAGCAACATG

Product: ribulokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDYLEIMEEGISYIVRESKIDPV
NIVGIGIDFTSSTIIFTDENLNPVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPK
IMEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIG
EVVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVMGTSTCHLMLNEKQHQVPGISGSVKGAIIPELF
AYEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTL
QTKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAV
SGGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQSLRVEG

Sequences:

>Translated_545_residues
MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDYLEIMEEGISYIVRESKIDPV
NIVGIGIDFTSSTIIFTDENLNPVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPK
IMEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIG
EVVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVMGTSTCHLMLNEKQHQVPGISGSVKGAIIPELF
AYEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTL
QTKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAV
SGGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQSLRVEG
>Mature_544_residues
SYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDYLEIMEEGISYIVRESKIDPVN
IVGIGIDFTSSTIIFTDENLNPVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPKI
MEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIGE
VVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVMGTSTCHLMLNEKQHQVPGISGSVKGAIIPELFA
YEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTLQ
TKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAVS
GGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQSLRVEG

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family

Homologues:

Organism=Homo sapiens, GI164663828, Length=567, Percent_Identity=25.2204585537919, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI164663830, Length=591, Percent_Identity=24.1962774957699, Blast_Score=132, Evalue=1e-30,
Organism=Escherichia coli, GI1786249, Length=550, Percent_Identity=29.8181818181818, Blast_Score=234, Evalue=8e-63,
Organism=Saccharomyces cerevisiae, GI6320314, Length=529, Percent_Identity=25.8979206049149, Blast_Score=145, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24657106, Length=551, Percent_Identity=26.497277676951, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24657102, Length=551, Percent_Identity=26.497277676951, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI21356323, Length=407, Percent_Identity=28.2555282555283, Blast_Score=125, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARAB_STAA1 (A7WYY2)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001441140.1
- ProteinModelPortal:   A7WYY2
- STRING:   A7WYY2
- EnsemblBacteria:   EBSTAT00000005241
- GeneID:   5559642
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_0550
- eggNOG:   COG1069
- GeneTree:   EBGT00050000024725
- HOGENOM:   HBG312681
- OMA:   NGRRTPD
- ProtClustDB:   PRK04123
- BioCyc:   SAUR418127:SAHV_0550-MONOMER
- HAMAP:   MF_00520
- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929
- PANTHER:   PTHR10196

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N

EC number: =2.7.1.16

Molecular weight: Translated: 60966; Mature: 60834

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDY
CCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHH
LEIMEEGISYIVRESKIDPVNIVGIGIDFTSSTIIFTDENLNPVHNLKQFKNNPHAYVKL
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCHHHHHHHHCCCCHHEEEE
WKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPKIMEVMNRAPEIMEKTAYIME
HHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHH
AGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIG
CCHHHHHHHCCCCCCCCCCCCHHEEECCCCCCEEEHHHHCCHHHHHHHHHHHCCCCCCHH
EVVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVMGTSTCHLMLNEK
HHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHHEECCCCCCCCEEEEEECCEEEEEECCC
QHQVPGISGSVKGAIIPELFAYEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMN
HHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
EKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTLQTKHEDIYRAYLEATAFGTK
HHHHHCCCCCCCEEEEEEECCCCCEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
MIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
SGGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQS
CCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRVEG
HCCCC
>Mature Secondary Structure 
SYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELNGLKIPHTYALQNSNDY
CEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHH
LEIMEEGISYIVRESKIDPVNIVGIGIDFTSSTIIFTDENLNPVHNLKQFKNNPHAYVKL
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCHHHHHHHHCCCCHHEEEE
WKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPKIMEVMNRAPEIMEKTAYIME
HHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHH
AGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFDKIDPKLSKVIQDKVSAPVVNIG
CCHHHHHHHCCCCCCCCCCCCHHEEECCCCCCEEEHHHHCCHHHHHHHHHHHCCCCCCHH
EVVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGIGSEKDKEMTMVMGTSTCHLMLNEK
HHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHHEECCCCCCCCEEEEEECCEEEEEECCC
QHQVPGISGSVKGAIIPELFAYEAGQSAVGDLFEYVAKQAPKSYVDEAANRNMTVFELMN
HHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
EKIKHQMPGESGLIALDWHNGNRSVLSDSNLTGCIFGLTLQTKHEDIYRAYLEATAFGTK
HHHHHCCCCCCCEEEEEEECCCCCEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
MIMQQYQDWHMEVEKVFACGGIPKKNAVMMDIYANVLNKKLIVMDSEYAPAIGAAILGAV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
SGGAHNSINDAVDAMKEPILYEINPEAEKVQRYETLFKAYKALHDIHGYKKANIMKDIQS
CCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRVEG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA