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The map label for this gene is ctsR

Identifier: 15926199

GI number: 15926199

Start: 560629

End: 561090

Strand: Direct

Name: ctsR

Synonym: SA0480

Alternate gene names: 15926199

Gene position: 560629-561090 (Clockwise)

Preceding gene: 15926197

Following gene: 15926200

Centisome position: 19.92

GC content: 30.95

Gene sequence:

>462_bases
ATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGAAATTCA
GAGAGCGAATATCGCACAGCGTTTTGATTGTGTACCATCACAATTAAATTATGTAATCAAAACACGATTCACTAATGAAC
ATGGTTATGAAATCGAAAGTAAACGTGGTGGTGGTGGTTACATCCGAATCACTAAAATTGAAAATAAAGATGCAACAGGT
TATATTAATCATTTGCTTCAGCTGATTGGACCTTCTATTTCTCAACAACAAGCTTATTATATTATTGATGGGCTTTTAGA
TAAAATGTTAATAAATGAACGTGAAGCTAAAATGATTCAAGCAGTTATTGATAGAGAAACGCTATCAATGGATATGGTTT
CTAGAGATATTATTAGAGCAAATATTTTAAAACGTTTGTTACCAGTTATAAATTATTACTAA

Upstream 100 bases:

>100_bases
TAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAG
GTCAAAAAGGGGTGATATAC

Downstream 100 bases:

>100_bases
ATGAAATGAGGTGTTGAAGTGCTTTGTGAAAATTGTCAACTTAATGAAGCGGAATTAAAAGTTAAAGTTACAAGTAAAAA
TAAAACAGAAGAAAAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATG
YINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQAVIDRETLSMDMVSRDIIRANILKRLLPVINYY

Sequences:

>Translated_153_residues
MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATG
YINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQAVIDRETLSMDMVSRDIIRANILKRLLPVINYY
>Mature_153_residues
MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATG
YINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQAVIDRETLSMDMVSRDIIRANILKRLLPVINYY

Specific function: Negative regulator of clpC, clpB and clpP transcription by binding directly and specifically to their promoter region

COG id: COG4463

COG function: function code K; Transcriptional repressor of class III stress genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CtsR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CTSR_STAA3 (Q2FJB8)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_493210.1
- STRING:   Q2FJB8
- EnsemblBacteria:   EBSTAT00000038428
- GeneID:   3913623
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_0507
- eggNOG:   COG4463
- GeneTree:   EBGT00050000025074
- HOGENOM:   HBG312520
- OMA:   KFQCVPS
- ProtClustDB:   CLSK872618
- GO:   GO:0006350
- InterPro:   IPR008463
- PIRSF:   PIRSF010607

Pfam domain/function: PF05848 CtsR

EC number: NA

Molecular weight: Translated: 17842; Mature: 17842

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCCEECC
KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCCEECC
KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA