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The map label for this gene is yddR [H]

Identifier: 15925461

GI number: 15925461

Start: 2608024

End: 2608791

Strand: Reverse

Name: yddR [H]

Synonym: SAV2471

Alternate gene names: 15925461

Gene position: 2608791-2608024 (Counterclockwise)

Preceding gene: 15925462

Following gene: 15925460

Centisome position: 90.63

GC content: 34.9

Gene sequence:

>768_bases
ATGAATATTAGACATATAAGAAATGCCACGGCCGTGATTGAGTATGGAGGTAAACGCATTTTGATTGATCCAATGTTAAG
TGATAAAGGTTCATTTGACCCTTTTCCAAATTCACCGAGACAAGATCAAAAAAATCCACTTGTAGAACTACCCATGGCAA
TTGAAGACATTATAAATGACATCGATTTAGTGATTTTAACGCATTTGCATATTGATCATTTTGATCCGAAAGCAATTGAA
GTATTGCCGAAAGATATTAAAATTTACGCACAAAATGAAGAAGATGCTAGTGAAGTAGAGCGTTATGGGTTTACAAATGT
TTCTGTATTTAATGATGTGACACACATTGGAGAAATTGAGTTGATTAAAACAGATGCTCAACATGGTCATGGTGAAATTT
TGAAGATGACAGGACATGTTCACGGCATGATTTTAAAACATTCTGAAGAGCCGACATTATACTTAGCAGCAGATACAGTT
TGGTTTGAAGGGGTTGAAAAAGCATTAAAAACGTATCAACCAGATGTTGTTGTTCTTAATGGTGGTGCAAATCAATTCTT
TGAAGGTGGGCCGTTAGTTATGGATGAACATGATGTGTTAAAAGTTGCTAATACATTGCCACTTGCGCAAATTGTTGTTG
TGCATATGGAAGCGGTCAATCATTGGCATTTATCTCGTAAAGAGCTGAATGAATTTATAAATTCTAACGACTTAGGTAAT
AGAGTTGTTGTACCAAATGACGGGGAATTATTAACCTTTGAAAAATAA

Upstream 100 bases:

>100_bases
ATTATTTAAAATCGATATCCAGTGGAAAAGAATTTGGCATGAAGTAGGCAATGTATGCATATTGTCGCAATGACAGACAT
ATGAAATAGGGGGATTTAAC

Downstream 100 bases:

>100_bases
ATGTTTGTTTATTTGATGAAGTGTATTGCTTAAAGCTAGTTTTAACGTATTTTACGTTGAAGCTGGTTTTTTTGTTTGAT
AAAAATTTTCAAAAGACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIE
VLPKDIKIYAQNEEDASEVERYGFTNVSVFNDVTHIGEIELIKTDAQHGHGEILKMTGHVHGMILKHSEEPTLYLAADTV
WFEGVEKALKTYQPDVVVLNGGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGN
RVVVPNDGELLTFEK

Sequences:

>Translated_255_residues
MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIE
VLPKDIKIYAQNEEDASEVERYGFTNVSVFNDVTHIGEIELIKTDAQHGHGEILKMTGHVHGMILKHSEEPTLYLAADTV
WFEGVEKALKTYQPDVVVLNGGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGN
RVVVPNDGELLTFEK
>Mature_255_residues
MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIE
VLPKDIKIYAQNEEDASEVERYGFTNVSVFNDVTHIGEIELIKTDAQHGHGEILKMTGHVHGMILKHSEEPTLYLAADTV
WFEGVEKALKTYQPDVVVLNGGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGN
RVVVPNDGELLTFEK

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 28719; Mature: 28719

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIIND
CCCCHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCH
IDLVILTHLHIDHFDPKAIEVLPKDIKIYAQNEEDASEVERYGFTNVSVFNDVTHIGEIE
HHEEEEEEEECCCCCCHHHEECCCCEEEEECCCCCHHHHHHHCCCCEEHHHHHHHCCCEE
LIKTDAQHGHGEILKMTGHVHGMILKHSEEPTLYLAADTVWFEGVEKALKTYQPDVVVLN
EEEECCCCCCCEEEEEECCEEEEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEE
GGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGN
CCCCCCCCCCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
RVVVPNDGELLTFEK
EEEECCCCCEEEECC
>Mature Secondary Structure
MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIIND
CCCCHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCH
IDLVILTHLHIDHFDPKAIEVLPKDIKIYAQNEEDASEVERYGFTNVSVFNDVTHIGEIE
HHEEEEEEEECCCCCCHHHEECCCCEEEEECCCCCHHHHHHHCCCCEEHHHHHHHCCCEE
LIKTDAQHGHGEILKMTGHVHGMILKHSEEPTLYLAADTVWFEGVEKALKTYQPDVVVLN
EEEECCCCCCCEEEEEECCEEEEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEE
GGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGN
CCCCCCCCCCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
RVVVPNDGELLTFEK
EEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]