Click here to switch to the map view.

The map label for this gene is 15925460

Identifier: 15925460

GI number: 15925460

Start: 2606513

End: 2607334

Strand: Reverse

Name: 15925460

Synonym: SAV2470

Alternate gene names: NA

Gene position: 2607334-2606513 (Counterclockwise)

Preceding gene: 15925461

Following gene: 15925459

Centisome position: 90.58

GC content: 35.4

Gene sequence:

>822_bases
ATGAATCGGCAGGTTATAGAATTTTCTAAGTATAATCCTTCGGGGAATATGACGATACTTGTTCATTCAAAACATGATGC
TAGTGAATATGCATCTATCGCCAATCAGTTGATGGCCGCAACACATGTATGTTGTGAACAGGTAGGCTTTATAGAATCAA
CACAAAATGATGATGGCAATGATTTTCACTTAGTTATGAGCGGTAATGAATTTTGCGGTAATGCGACGATGTCATATATA
CATCATTTGCAGGAAAGTCATTTGCTTAAAGACCAACAGTTTAAGGTGAAGGTATCTGGCTGTTCGGATTTAGTGCAATG
CGCAATTCATGATTGCCAATACTATGAAGTTCAAATGCCACAAGCCCATCGTGTTGTGCCAACAACAATTAATATGGGTA
ATCATTCATGGAAAGCATTAGAAATTATTTATGAAACATATGTACATTATGTGATTCCAGTTAAACAAGTAACAACTGAA
ATTCAACATTTGGTTGAAGCATTTGTGCGTGAGCAACAATGGAGTCACAAATATAAAACAGTAGGTATGATGCTTTTTGA
TGAACAACGTCAATTTTTACAGCCATTAATCTATATACCAGAAATTCAAAGTTTAATTTGGGAAAATAGCTGTGGTTCTG
GTACAGCATCAATTGGGGTTTTTAATAATTATCAACGTAATGACGCATGCAAAGATTTTACAGTACATCAGCCAGGGGGC
AGTATTTTAGTGACATCAAAGCGATGTCATCAATTGGGATATCAAACTTCAATTAAAGGACAGGTTACAACTGTAGCTAC
AGGAAAAGCATATATAGAATAA

Upstream 100 bases:

>100_bases
TTTTAGAGGAATACAGTTGCTTGCTTCGCACCAACTGCATAAGAGCCTCTAATTACTTATGGTAAAAGAGGCTCTAAAAA
TACATCTAAAGGAGTGTCGT

Downstream 100 bases:

>100_bases
GGAGCCTACAATGAATAACTTTAATAATGAAATCAAATTGATATTACAACAATATTTGGAAAAGTTTGAAGCGCATTACG
AGCGTGTATTACAAGACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVCCEQVGFIESTQNDDGNDFHLVMSGNEFCGNATMSYI
HHLQESHLLKDQQFKVKVSGCSDLVQCAIHDCQYYEVQMPQAHRVVPTTINMGNHSWKALEIIYETYVHYVIPVKQVTTE
IQHLVEAFVREQQWSHKYKTVGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASIGVFNNYQRNDACKDFTVHQPGG
SILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE

Sequences:

>Translated_273_residues
MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVCCEQVGFIESTQNDDGNDFHLVMSGNEFCGNATMSYI
HHLQESHLLKDQQFKVKVSGCSDLVQCAIHDCQYYEVQMPQAHRVVPTTINMGNHSWKALEIIYETYVHYVIPVKQVTTE
IQHLVEAFVREQQWSHKYKTVGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASIGVFNNYQRNDACKDFTVHQPGG
SILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE
>Mature_273_residues
MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVCCEQVGFIESTQNDDGNDFHLVMSGNEFCGNATMSYI
HHLQESHLLKDQQFKVKVSGCSDLVQCAIHDCQYYEVQMPQAHRVVPTTINMGNHSWKALEIIYETYVHYVIPVKQVTTE
IQHLVEAFVREQQWSHKYKTVGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASIGVFNNYQRNDACKDFTVHQPGG
SILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE

Specific function: Unknown

COG id: COG0253

COG function: function code E; Diaminopimelate epimerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31004; Mature: 31004

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVCCEQVGFIESTQNDDGN
CCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DFHLVMSGNEFCGNATMSYIHHLQESHLLKDQQFKVKVSGCSDLVQCAIHDCQYYEVQMP
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCEEEEEECC
QAHRVVPTTINMGNHSWKALEIIYETYVHYVIPVKQVTTEIQHLVEAFVREQQWSHKYKT
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHCCHHHH
VGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASIGVFNNYQRNDACKDFTVHQPGG
HHHHEEHHHHHHHHHHEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCC
SILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE
CEEEECHHHHHCCCCCCCCCEEEEEECCCEECC
>Mature Secondary Structure
MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVCCEQVGFIESTQNDDGN
CCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DFHLVMSGNEFCGNATMSYIHHLQESHLLKDQQFKVKVSGCSDLVQCAIHDCQYYEVQMP
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCEEEEEECC
QAHRVVPTTINMGNHSWKALEIIYETYVHYVIPVKQVTTEIQHLVEAFVREQQWSHKYKT
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHCCHHHH
VGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASIGVFNNYQRNDACKDFTVHQPGG
HHHHEEHHHHHHHHHHEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCC
SILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE
CEEEECHHHHHCCCCCCCCCEEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA