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The map label for this gene is lacD

Identifier: 15925182

GI number: 15925182

Start: 2335638

End: 2336618

Strand: Reverse

Name: lacD

Synonym: SAV2192

Alternate gene names: 15925182

Gene position: 2336618-2335638 (Counterclockwise)

Preceding gene: 15925183

Following gene: 15925181

Centisome position: 81.17

GC content: 35.37

Gene sequence:

>981_bases
ATGTCAAAATCTAATCAAAAAATCGCATCAATTGAACAATTAAGTAATAACGAAGGTATCATTTCTGCATTAGCATTTGA
CCAACGTGGTGCTTTAAAACGAATGATGGCTAAACATCAAACGGAAGAGCCAACTGTCGCTCAAATTGAACAATTAAAAG
TATTGGTTGCGGAAGAATTAACACAATATGCGTCTTCAATTTTATTAGATCCAGAATACGGTTTACCAGCATCTGATGCA
CGTAACAAAGATTGTGGATTATTGCTAGCTTATGAAAAAACTGGTTATGACGTAAATGCTAAAGGTCGTTTACCTGACTG
TTTAGTAGAGTGGTCTGCAAAACGTTTAAAAGAACAAGGTGCAAATGCTGTTAAATTCTTACTTTACTATGATGTTGATG
ATGCTGAAGAAATTAACATTCAAAAGAAAGCATACATTGAAAGAATCGGTTCAGAATGTGTTGCAGAAGACATTCCTTTC
TTCTTAGAAGTATTAACATACGATGACAACATTCCTGATAACGGTAGTGTTGAATTCGCAAAAGTTAAGCCTAGAAAGGT
TAACGAAGCAATGAAATTATTCTCAGAACCACGCTTTAATGTTGATGTATTGAAAGTTGAAGTACCAGTAAACATGAAGT
ATGTAGAAGGCTTTGCTGAAGGTGAAGTGGTTTATACAAAAGAGGAAGCGGCACAACACTTTAAAGATCAAGATGCAGCA
ACTCATTTACCATACATTTACTTAAGTGCTGGTGTTTCTGCGGAATTATTCCAAGAAACTTTAAAATTTGCTCACGAAGC
TGGTGCTAAATTCAACGGTGTACTTTGTGGCCGTGCTACATGGTCTGGTGCTGTTCAAGTATACATTGAACAAGGTGAAG
ATGCTGCTCGTGAATGGTTACGTACAACTGGTTTCAAAAATATTGATGACTTAAATAAAGTATTAAAAGATACTGCGACA
TCTTGGAAACAAAGAAAATAA

Upstream 100 bases:

>100_bases
TTTAGGCATGCTGAATGCGCAAGAAGCACAAACAGGATATGTCAATTTAAATAATTATGATGAATTATTCAATCAAATTG
AAGTTTTAGAGGTGTAAATA

Downstream 100 bases:

>100_bases
GTATAAAAGGGGATTAATGCTATGAATAGAGAAGAAGTCCAATTATTAGGTTTTGAAATTGTTGCATTTGCAGGGGATGC
ACGTTCTAAGTTTTTAGAAG

Product: tagatose 1,6-diphosphate aldolase

Products: NA

Alternate protein names: D-tagatose-1,6-bisphosphate aldolase; Tagatose-bisphosphate aldolase

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDA
RNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPF
FLEVLTYDDNIPDNGSVEFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWLRTTGFKNIDDLNKVLKDTAT
SWKQRK

Sequences:

>Translated_326_residues
MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDA
RNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPF
FLEVLTYDDNIPDNGSVEFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWLRTTGFKNIDDLNKVLKDTAT
SWKQRK
>Mature_325_residues
SKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDAR
NKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFF
LEVLTYDDNIPDNGSVEFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAAT
HLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWLRTTGFKNIDDLNKVLKDTATS
WKQRK

Specific function: Unknown

COG id: COG3684

COG function: function code G; Tagatose-1,6-bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase lacD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LACD_STAA1 (A7X574)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442766.1
- ProteinModelPortal:   A7X574
- SMR:   A7X574
- STRING:   A7X574
- EnsemblBacteria:   EBSTAT00000003780
- GeneID:   5561589
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2176
- eggNOG:   COG3684
- GeneTree:   EBGT00050000025283
- HOGENOM:   HBG290828
- OMA:   RVGSECV
- ProtClustDB:   PRK12399
- BioCyc:   SAUR418127:SAHV_2176-MONOMER
- HAMAP:   MF_00734
- InterPro:   IPR013785
- InterPro:   IPR002915
- InterPro:   IPR005927
- Gene3D:   G3DSA:3.20.20.70
- TIGRFAMs:   TIGR01232

Pfam domain/function: PF01791 DeoC

EC number: =4.1.2.40

Molecular weight: Translated: 36596; Mature: 36465

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEEL
CCCCCHHHHHHHHHCCCCCEEEEEHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQG
HHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHCC
ANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFA
CCEEEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
KVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
ECCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHCCCCCCEEEEHHHHHHHHCCCCCH
THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWL
HCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHH
RTTGFKNIDDLNKVLKDTATSWKQRK
HHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEEL
CCCCHHHHHHHHHCCCCCEEEEEHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQG
HHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHCC
ANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFA
CCEEEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
KVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
ECCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHCCCCCCEEEEHHHHHHHHCCCCCH
THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWL
HCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHH
RTTGFKNIDDLNKVLKDTATSWKQRK
HHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA