Click here to switch to the map view.

The map label for this gene is acaC [H]

Identifier: 15921636

GI number: 15921636

Start: 1359456

End: 1359875

Strand: Direct

Name: acaC [H]

Synonym: ST1351

Alternate gene names: 15921636

Gene position: 1359456-1359875 (Clockwise)

Preceding gene: 15921635

Following gene: 15921637

Centisome position: 50.45

GC content: 33.81

Gene sequence:

>420_bases
GTGAAGTTAAAAGTGAAAATTAGTCCTCCAAGAAATTGGAGGTTAAAAGAAACTTTATATTCAATTGTTTTAGGCAAGTG
TGAAAAATGCGGAAATATAATGTATCCTTATCAGCAATTATGTACTTCATGCGGTTCGACTAACGTGAAGAAAATTGTTT
CAAGAGGTCACGGAAAACTAATTGAATACACAATATCTTATCAGTCACGTGAGGGGTATGAAAAGGCTTTACCTATGGCT
GTAGGATTAATAGAATTAGATGAAGGAGTTAGGATTTTAGCCCCTCTTACTGATACTGATAACATTAAAGAAGGTGCTGA
GGTTGAAGCTGTTCTAAGGAGAATTACTGCTGATTCCAATAATGGTTTAATACAGTACGGTATTAAATTTAGAGTGATAG
ATAATGCAAGAGATAATTGA

Upstream 100 bases:

>100_bases
TTAGAGGCGAATTTCCGGGAAAGAAAGCTATAGGTGAAAGTGGGGTAGTTATTTCGGCAGACGATTTAGTCACATCTTCT
TATATTTCAATTTTAAAGAG

Downstream 100 bases:

>100_bases
TGAGGTAGTTAATAAGGCTCTTAAAGGTGAGATCGAGCTTCATGAGATAGATAATTTTTTAGAAGCAAATGCTGCAATGG
TAGCTAGAAGATTAGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKLKVKISPPRNWRLKETLYSIVLGKCEKCGNIMYPYQQLCTSCGSTNVKKIVSRGHGKLIEYTISYQSREGYEKALPMA
VGLIELDEGVRILAPLTDTDNIKEGAEVEAVLRRITADSNNGLIQYGIKFRVIDNARDN

Sequences:

>Translated_139_residues
MKLKVKISPPRNWRLKETLYSIVLGKCEKCGNIMYPYQQLCTSCGSTNVKKIVSRGHGKLIEYTISYQSREGYEKALPMA
VGLIELDEGVRILAPLTDTDNIKEGAEVEAVLRRITADSNNGLIQYGIKFRVIDNARDN
>Mature_139_residues
MKLKVKISPPRNWRLKETLYSIVLGKCEKCGNIMYPYQQLCTSCGSTNVKKIVSRGHGKLIEYTISYQSREGYEKALPMA
VGLIELDEGVRILAPLTDTDNIKEGAEVEAVLRRITADSNNGLIQYGIKFRVIDNARDN

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 15637; Mature: 15637

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKVKISPPRNWRLKETLYSIVLGKCEKCGNIMYPYQQLCTSCGSTNVKKIVSRGHGKL
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCE
IEYTISYQSREGYEKALPMAVGLIELDEGVRILAPLTDTDNIKEGAEVEAVLRRITADSN
EEEEEECCCCCCHHHHHHHHHCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
NGLIQYGIKFRVIDNARDN
CCEEEECEEEEEECCCCCC
>Mature Secondary Structure
MKLKVKISPPRNWRLKETLYSIVLGKCEKCGNIMYPYQQLCTSCGSTNVKKIVSRGHGKL
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCE
IEYTISYQSREGYEKALPMAVGLIELDEGVRILAPLTDTDNIKEGAEVEAVLRRITADSN
EEEEEECCCCCCHHHHHHHHHCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
NGLIQYGIKFRVIDNARDN
CCEEEECEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550425 [H]