Click here to switch to the map view.

The map label for this gene is 15921532

Identifier: 15921532

GI number: 15921532

Start: 1267736

End: 1268635

Strand: Direct

Name: 15921532

Synonym: ST1268

Alternate gene names: NA

Gene position: 1267736-1268635 (Clockwise)

Preceding gene: 15921531

Following gene: 15921533

Centisome position: 47.04

GC content: 29.67

Gene sequence:

>900_bases
ATGAGGATGAGGAAAATGGTTACTATTGATGAGGTTGCAGAGATACTTTCAAAAAGATCATTAGAGTATTCTATGATTAA
TTATCCAGATAAAAAGGAAAAATCAATAGATATAATAGCTGTAAATAGGAATAAGAAAATGATAGTTAAAATTCTAGGTA
ATAAGAAATCATCGAAAATCAAAAGTGACTTGAAAAACATAGCAAGAATTGGACTGGGAATTCCGGTAATAATTGAAGAT
TCTACTGAGCAAGAAATAATAAATGATAGAGGTAACATATTAGGTATGAATGTAGAGACTTTTGAAAGAATTCTAGATGG
AGAGAAAGTCTTCCTATATAAGACAAGGGGAGGAATCTTTGTTAAAATTAACTCTAAGGAGTTAAAAAAGAAAAGAGAAG
AGATGGGCTTAAGCTTAGGAGAAGTTGCTCAAGCTTTAGGAGTTTCGAGAATATCTATCTACGATTATGAAAGAGAAGAT
TCTTATGTGTCGATTGATATTGCTGAAAAACTTGTTGAACTTTTTGGAGATGATATATTAGGTGATGTATTAAGTGGTTT
TAAGGTTGACGAAAAAGATATTAACCTAGAAACGCAAACAGCTAGCCTTTCTGATAAAATTATGTTAAATTTGAATGAAA
AAGGGTATAAAGTAGTGAAGATGAACTTTACTGCAGTGGATATTATTGCCTCAAAGAATGATAAGAAACTATTATTTTCA
GTGGAGGCTGATAACGTCTCTAAGTCCTTAAGAAAATTTAATGAAGCTAAAAAGATTACCAGTAAAATAAAAGCAAGTCT
TATTGTGGTTGTGAAAGAGAGCAAAAATAAAAAAATATATGAAAAAGAGGATTTTAATACAATAAGTGAAAACGAAATTA
TGAACTATGAATTTGATTGA

Upstream 100 bases:

>100_bases
AAAGATGTAAGTAAGGGACTACGTACAGGAGATATTGAAAAATTAATAAAAGAATATAAATCTTTAATAATTATAACATT
AAGTCCTATTAATTTAGCTA

Downstream 100 bases:

>100_bases
AATAAGAGAAGGTAAGGCTTCTTTACTAATTCCTAATCCTAAAGATTATGAGAAAGAAGGGAGATATGATCCCAGTTGGT
CTCCAGTTTTCTACAATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRMRKMVTIDEVAEILSKRSLEYSMINYPDKKEKSIDIIAVNRNKKMIVKILGNKKSSKIKSDLKNIARIGLGIPVIIED
STEQEIINDRGNILGMNVETFERILDGEKVFLYKTRGGIFVKINSKELKKKREEMGLSLGEVAQALGVSRISIYDYERED
SYVSIDIAEKLVELFGDDILGDVLSGFKVDEKDINLETQTASLSDKIMLNLNEKGYKVVKMNFTAVDIIASKNDKKLLFS
VEADNVSKSLRKFNEAKKITSKIKASLIVVVKESKNKKIYEKEDFNTISENEIMNYEFD

Sequences:

>Translated_299_residues
MRMRKMVTIDEVAEILSKRSLEYSMINYPDKKEKSIDIIAVNRNKKMIVKILGNKKSSKIKSDLKNIARIGLGIPVIIED
STEQEIINDRGNILGMNVETFERILDGEKVFLYKTRGGIFVKINSKELKKKREEMGLSLGEVAQALGVSRISIYDYERED
SYVSIDIAEKLVELFGDDILGDVLSGFKVDEKDINLETQTASLSDKIMLNLNEKGYKVVKMNFTAVDIIASKNDKKLLFS
VEADNVSKSLRKFNEAKKITSKIKASLIVVVKESKNKKIYEKEDFNTISENEIMNYEFD
>Mature_299_residues
MRMRKMVTIDEVAEILSKRSLEYSMINYPDKKEKSIDIIAVNRNKKMIVKILGNKKSSKIKSDLKNIARIGLGIPVIIED
STEQEIINDRGNILGMNVETFERILDGEKVFLYKTRGGIFVKINSKELKKKREEMGLSLGEVAQALGVSRISIYDYERED
SYVSIDIAEKLVELFGDDILGDVLSGFKVDEKDINLETQTASLSDKIMLNLNEKGYKVVKMNFTAVDIIASKNDKKLLFS
VEADNVSKSLRKFNEAKKITSKIKASLIVVVKESKNKKIYEKEDFNTISENEIMNYEFD

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1268_SULTO (Q971W0)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_377201.1
- ProteinModelPortal:   Q971W0
- SMR:   Q971W0
- GeneID:   1459268
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST1268
- NMPDR:   fig|273063.1.peg.1369
- HOGENOM:   HBG553343
- OMA:   YLGVSRR
- ProtClustDB:   CLSK802931
- BioCyc:   STOK273063:ST1268-MONOMER
- HAMAP:   MF_00584
- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 34075; Mature: 34075

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMRKMVTIDEVAEILSKRSLEYSMINYPDKKEKSIDIIAVNRNKKMIVKILGNKKSSKI
CCCCCEECHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHH
KSDLKNIARIGLGIPVIIEDSTEQEIINDRGNILGMNVETFERILDGEKVFLYKTRGGIF
HHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCEEECCHHHHHHHHCCCEEEEEEECCCEE
VKINSKELKKKREEMGLSLGEVAQALGVSRISIYDYEREDSYVSIDIAEKLVELFGDDIL
EEECHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHCCHHH
GDVLSGFKVDEKDINLETQTASLSDKIMLNLNEKGYKVVKMNFTAVDIIASKNDKKLLFS
HHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECEEEEEEECCCCCEEEEE
VEADNVSKSLRKFNEAKKITSKIKASLIVVVKESKNKKIYEKEDFNTISENEIMNYEFD
EECCHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MRMRKMVTIDEVAEILSKRSLEYSMINYPDKKEKSIDIIAVNRNKKMIVKILGNKKSSKI
CCCCCEECHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHH
KSDLKNIARIGLGIPVIIEDSTEQEIINDRGNILGMNVETFERILDGEKVFLYKTRGGIF
HHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCEEECCHHHHHHHHCCCEEEEEEECCCEE
VKINSKELKKKREEMGLSLGEVAQALGVSRISIYDYEREDSYVSIDIAEKLVELFGDDIL
EEECHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHCCHHH
GDVLSGFKVDEKDINLETQTASLSDKIMLNLNEKGYKVVKMNFTAVDIIASKNDKKLLFS
HHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECEEEEEEECCCCCEEEEE
VEADNVSKSLRKFNEAKKITSKIKASLIVVVKESKNKKIYEKEDFNTISENEIMNYEFD
EECCHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479