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The map label for this gene is 15920498

Identifier: 15920498

GI number: 15920498

Start: 323716

End: 324024

Strand: Reverse

Name: 15920498

Synonym: ST0306

Alternate gene names: NA

Gene position: 324024-323716 (Counterclockwise)

Preceding gene: 15920501

Following gene: 15920497

Centisome position: 12.02

GC content: 42.39

Gene sequence:

>309_bases
ATGAAAGAAACAGGACATAATTTAAATATGGGTTATAGGGTTTTCTCAGCCGGGCAATATAAGATACGTCAAAGAGGGAA
TAAGTATTATGTTTACAAGATAGAGAAGGATTCTAATGGTAACGTAAAGGAAACTTACGTAGGTCCTTTAGATAAGATAG
TGGAATTTTACGTTAGCATTGGGGGTGTGGGGGTATCCCCCACAGTGGACCGGCCGGGATTTGAACCCGGGACCTCTCGG
ATGCCAACCGAGCACTCTTCCAGGCTGAGCTACCGGCCCATAACTTACTATTATATAATAGCTAATTAA

Upstream 100 bases:

>100_bases
ATAATAACACTAAACGGTTATTATTACTAATATAGAATTTTTTATCTCTCTTTTAATCTAACAGATAACTAGGGCAATAA
CCTCGTAACTAAAAGATTAT

Downstream 100 bases:

>100_bases
TCTTTCTCATCTTAAACAGATGGGAACCCCTCTGTTTCCACTGGAAACAATATAACTTTAGCTTTTTCTTATTCAAGATG
TAGTGAATTATACAAAACGT

Product: integrase

Products: NA

Alternate protein names: SSV1 Integrase Fragment Homolog

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MKETGHNLNMGYRVFSAGQYKIRQRGNKYYVYKIEKDSNGNVKETYVGPLDKIVEFYVSIGGVGVSPTVDRPGFEPGTSR
MPTEHSSRLSYRPITYYYIIAN

Sequences:

>Translated_102_residues
MKETGHNLNMGYRVFSAGQYKIRQRGNKYYVYKIEKDSNGNVKETYVGPLDKIVEFYVSIGGVGVSPTVDRPGFEPGTSR
MPTEHSSRLSYRPITYYYIIAN
>Mature_102_residues
MKETGHNLNMGYRVFSAGQYKIRQRGNKYYVYKIEKDSNGNVKETYVGPLDKIVEFYVSIGGVGVSPTVDRPGFEPGTSR
MPTEHSSRLSYRPITYYYIIAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11653; Mature: 11653

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETGHNLNMGYRVFSAGQYKIRQRGNKYYVYKIEKDSNGNVKETYVGPLDKIVEFYVSI
CCCCCCCCCCCEEEEECCCEEEEECCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHH
GGVGVSPTVDRPGFEPGTSRMPTEHSSRLSYRPITYYYIIAN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKETGHNLNMGYRVFSAGQYKIRQRGNKYYVYKIEKDSNGNVKETYVGPLDKIVEFYVSI
CCCCCCCCCCCEEEEECCCEEEEECCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHH
GGVGVSPTVDRPGFEPGTSRMPTEHSSRLSYRPITYYYIIAN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA