Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is 15920496

Identifier: 15920496

GI number: 15920496

Start: 321729

End: 322310

Strand: Reverse

Name: 15920496

Synonym: ST0304

Alternate gene names: NA

Gene position: 322310-321729 (Counterclockwise)

Preceding gene: 15920497

Following gene: 15920491

Centisome position: 11.96

GC content: 28.01

Gene sequence:

>582_bases
ATGAGGAAACAGTTATTAAGGCAATTTCTGAAAAAGATAGTAAAATTGCTAGTCTCTGGGATAGATGATGGATACTTTCC
TTTAAAATATAAGGGCAGAAACGGCCGTACGGTAATGTTATCAGTAGTTTTTAAGGATTATGATATAATTGACATAGATT
TTGATTTTATAATTGTAGATGGTGATGATGGCACTTCTGTTTTGAATTCCTTACAAACTGGTGATGTATGTATATTAGAT
GGATTAACCTTTGGTGGATTTAATTTTGTAAATCCTAGTGAATTAAAAAGTAAATATATTATATTTTATTCATCTAAACC
AAATATATTCAAAATTACTAGAGCGTTAGATAGACATTTCAATGATGAAAGGAGAGATATCATTATAAACGTGATTTCTA
ACTTGACAAGAGTATCTACTTTGAGGGGCGACGTTTACATATATACAAATTTAGATCTAAAAATGGCAAAAAATATTATT
GAGGAATATCAAGTATTTGATAGAATACCTTTACCACTAAAAATAGCTCATGAAATTTCAAGTAGTTTGTCTACATTTCT
TTTATCTAAAAAAATCATTTAG

Upstream 100 bases:

>100_bases
AGTGATATTATTAATGAATTAGATATGTTAGGAATTATTACTGCAAGGGTTGTGAATAGAGGGAGATATGGGAAAACTAA
GGAAGTCAACCTAGCAGTTA

Downstream 100 bases:

>100_bases
CTACAACTCTCACTTTCTTGAATGTTTTTAGATAGTTTTATTCTTTCTTCTCTTTCCTTTAATCTTTCATCAAATATTCT
CTTTTCTTTTTCTGTAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVDGDDGTSVLNSLQTGDVCILD
GLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHFNDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNII
EEYQVFDRIPLPLKIAHEISSSLSTFLLSKKII

Sequences:

>Translated_193_residues
MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVDGDDGTSVLNSLQTGDVCILD
GLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHFNDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNII
EEYQVFDRIPLPLKIAHEISSSLSTFLLSKKII
>Mature_193_residues
MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVDGDDGTSVLNSLQTGDVCILD
GLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHFNDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNII
EEYQVFDRIPLPLKIAHEISSSLSTFLLSKKII

Specific function: Unknown

COG id: COG1628

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0215 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y304_SULTO (Q975X4)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376165.1
- ProteinModelPortal:   Q975X4
- SMR:   Q975X4
- GeneID:   1458209
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0304
- NMPDR:   fig|273063.1.peg.333
- HOGENOM:   HBG553465
- OMA:   NDERRDI
- ProtClustDB:   CLSK802635
- BioCyc:   STOK273063:ST0304-MONOMER
- HAMAP:   MF_00582
- InterPro:   IPR002802
- PIRSF:   PIRSF006380
- ProDom:   PD016744

Pfam domain/function: PF01949 DUF99

EC number: NA

Molecular weight: Translated: 22184; Mature: 22184

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVD
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEEEEEEEE
GDDGTSVLNSLQTGDVCILDGLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHF
CCCCHHHHHHCCCCCEEEECCCEECCCCCCCHHHCCCEEEEEECCCCCEEHHHHHHHHCC
NDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNIIEEYQVFDRIPLPLKIAHEIS
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SSLSTFLLSKKII
HHHHHHHHHHCCC
>Mature Secondary Structure
MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVD
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEEEEEEEE
GDDGTSVLNSLQTGDVCILDGLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHF
CCCCHHHHHHCCCCCEEEECCCEECCCCCCCHHHCCCEEEEEECCCCCEEHHHHHHHHCC
NDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNIIEEYQVFDRIPLPLKIAHEIS
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SSLSTFLLSKKII
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479