| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920496
Identifier: 15920496
GI number: 15920496
Start: 321729
End: 322310
Strand: Reverse
Name: 15920496
Synonym: ST0304
Alternate gene names: NA
Gene position: 322310-321729 (Counterclockwise)
Preceding gene: 15920497
Following gene: 15920491
Centisome position: 11.96
GC content: 28.01
Gene sequence:
>582_bases ATGAGGAAACAGTTATTAAGGCAATTTCTGAAAAAGATAGTAAAATTGCTAGTCTCTGGGATAGATGATGGATACTTTCC TTTAAAATATAAGGGCAGAAACGGCCGTACGGTAATGTTATCAGTAGTTTTTAAGGATTATGATATAATTGACATAGATT TTGATTTTATAATTGTAGATGGTGATGATGGCACTTCTGTTTTGAATTCCTTACAAACTGGTGATGTATGTATATTAGAT GGATTAACCTTTGGTGGATTTAATTTTGTAAATCCTAGTGAATTAAAAAGTAAATATATTATATTTTATTCATCTAAACC AAATATATTCAAAATTACTAGAGCGTTAGATAGACATTTCAATGATGAAAGGAGAGATATCATTATAAACGTGATTTCTA ACTTGACAAGAGTATCTACTTTGAGGGGCGACGTTTACATATATACAAATTTAGATCTAAAAATGGCAAAAAATATTATT GAGGAATATCAAGTATTTGATAGAATACCTTTACCACTAAAAATAGCTCATGAAATTTCAAGTAGTTTGTCTACATTTCT TTTATCTAAAAAAATCATTTAG
Upstream 100 bases:
>100_bases AGTGATATTATTAATGAATTAGATATGTTAGGAATTATTACTGCAAGGGTTGTGAATAGAGGGAGATATGGGAAAACTAA GGAAGTCAACCTAGCAGTTA
Downstream 100 bases:
>100_bases CTACAACTCTCACTTTCTTGAATGTTTTTAGATAGTTTTATTCTTTCTTCTCTTTCCTTTAATCTTTCATCAAATATTCT CTTTTCTTTTTCTGTAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVDGDDGTSVLNSLQTGDVCILD GLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHFNDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNII EEYQVFDRIPLPLKIAHEISSSLSTFLLSKKII
Sequences:
>Translated_193_residues MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVDGDDGTSVLNSLQTGDVCILD GLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHFNDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNII EEYQVFDRIPLPLKIAHEISSSLSTFLLSKKII >Mature_193_residues MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVDGDDGTSVLNSLQTGDVCILD GLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHFNDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNII EEYQVFDRIPLPLKIAHEISSSLSTFLLSKKII
Specific function: Unknown
COG id: COG1628
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0215 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y304_SULTO (Q975X4)
Other databases:
- EMBL: BA000023 - RefSeq: NP_376165.1 - ProteinModelPortal: Q975X4 - SMR: Q975X4 - GeneID: 1458209 - GenomeReviews: BA000023_GR - KEGG: sto:ST0304 - NMPDR: fig|273063.1.peg.333 - HOGENOM: HBG553465 - OMA: NDERRDI - ProtClustDB: CLSK802635 - BioCyc: STOK273063:ST0304-MONOMER - HAMAP: MF_00582 - InterPro: IPR002802 - PIRSF: PIRSF006380 - ProDom: PD016744
Pfam domain/function: PF01949 DUF99
EC number: NA
Molecular weight: Translated: 22184; Mature: 22184
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVD CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEEEEEEEE GDDGTSVLNSLQTGDVCILDGLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHF CCCCHHHHHHCCCCCEEEECCCEECCCCCCCHHHCCCEEEEEECCCCCEEHHHHHHHHCC NDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNIIEEYQVFDRIPLPLKIAHEIS CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH SSLSTFLLSKKII HHHHHHHHHHCCC >Mature Secondary Structure MRKQLLRQFLKKIVKLLVSGIDDGYFPLKYKGRNGRTVMLSVVFKDYDIIDIDFDFIIVD CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEEEEEEEE GDDGTSVLNSLQTGDVCILDGLTFGGFNFVNPSELKSKYIIFYSSKPNIFKITRALDRHF CCCCHHHHHHCCCCCEEEECCCEECCCCCCCHHHCCCEEEEEECCCCCEEHHHHHHHHCC NDERRDIIINVISNLTRVSTLRGDVYIYTNLDLKMAKNIIEEYQVFDRIPLPLKIAHEIS CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH SSLSTFLLSKKII HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479