Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
---|---|
Accession | NC_003106 |
Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920332
Identifier: 15920332
GI number: 15920332
Start: 179081
End: 180142
Strand: Reverse
Name: 15920332
Synonym: ST0155
Alternate gene names: NA
Gene position: 180142-179081 (Counterclockwise)
Preceding gene: 15920333
Following gene: 15920330
Centisome position: 6.68
GC content: 34.27
Gene sequence:
>1062_bases ATGTTTAAGGTAATTGATGATCACGCTCACTGGTTTAGTGTAAAACCCCTAGATGAAAAAGGCTTAGCATTAGAATCAGC AGAAAGTTGGATCGAAGGAGAGATTAACGCTGACGTAGTTACAATGAATTTGTTAAAACCATTTTTCCTAGTCTTAAAAC ACAGACTGAAGAAACTTTTAGGAGAGAATTTCATAGAGGAAAGAAATAGAATGATTAAAGATGACCCAGTAAACTACGTG AAATTTCTATTTCAAGATGCTAAGATAGAAGGTATGGTGATTGATGAAGGTTTTGGGAAAAAAGAAATTGAACCACCGGT AAAGTATAAACTTTTGTTTAGAATAGAGAAGATTATAAATGACGAGATGTTTAAGAAACCGTTTGATAAAGCCGTAGAGT ATTTCGAAGAGAGCTTGAGAGAGAAGATCAGAACGGGTTATTCTGGTTTTAAGACCATTATAGCTTATAGAACAGGACTA AAAATTTCATGTAACGAGAGTAAGGCTTTTGAGGACTTTTATGATAAGGAAAGAGATTGGTTTGGAAAAAGAGCTAAGGG CTTCCGAGATTTCCTAGTTTGTAAAACATTAGAAATAGCTAAAGAACTTAAAGTACCAGTACAAATACACACTGGGGCTG GAGATAGAGATATAAAATTTGATTTATCACTTCCCTCTTACCTTACAGATATTGTCAGAAAATATGAAGGAAAAGTTGTT TTTGTACATGCCGGTTACCCATATCATAGGGAAACTGCATGGATGAGTTACATTTTTCCTTCAGTGTATCTTGATGTTTC ACAATTTAATCCATTAGCACCGCTTTCGGCATTCAATGTTATAAAAGAAATATTTGAGGTATCACCAGCAAATAAAGTAC TTTACGGTTCCGATGCGTTTAACGTTCCAGAAATTGCTTGGCTTGGTGCAAAATTAGCTAAGGAAAGTTTTGAGGAGTTA CGGTCAGAGTTTTTAAAGAGAGATCTAATGTCAGAAGAAGATTTAGAAGTACTTAAGGAGAGATTCTTTTACAAAAATGC AGAAGAACTTTATGATTTCTAA
Upstream 100 bases:
>100_bases GTAGGGAGAGAAATTGTGGAGGAGTTTATCAGAGTAAAGATGGCTGAAGTTGAAGAATTCGAAAGCTTAGTAACAGATTG GGAATACGAGGTATATAAGT
Downstream 100 bases:
>100_bases AAATTTTAAGCAATTTCATATTTAATTCGCTAATTGGAAAAATTTGGGTCATTCAGGGGTTATGGGAGATTCATAGCTCT TTTGTGGATTCATTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase Of TIM-Barrel Fold Protein; Amidohydrolase Family; TIM-Barrel Fold Metal-Dependent Hydrolase; Cytochrome Assembly Protein
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MFKVIDDHAHWFSVKPLDEKGLALESAESWIEGEINADVVTMNLLKPFFLVLKHRLKKLLGENFIEERNRMIKDDPVNYV KFLFQDAKIEGMVIDEGFGKKEIEPPVKYKLLFRIEKIINDEMFKKPFDKAVEYFEESLREKIRTGYSGFKTIIAYRTGL KISCNESKAFEDFYDKERDWFGKRAKGFRDFLVCKTLEIAKELKVPVQIHTGAGDRDIKFDLSLPSYLTDIVRKYEGKVV FVHAGYPYHRETAWMSYIFPSVYLDVSQFNPLAPLSAFNVIKEIFEVSPANKVLYGSDAFNVPEIAWLGAKLAKESFEEL RSEFLKRDLMSEEDLEVLKERFFYKNAEELYDF
Sequences:
>Translated_353_residues MFKVIDDHAHWFSVKPLDEKGLALESAESWIEGEINADVVTMNLLKPFFLVLKHRLKKLLGENFIEERNRMIKDDPVNYV KFLFQDAKIEGMVIDEGFGKKEIEPPVKYKLLFRIEKIINDEMFKKPFDKAVEYFEESLREKIRTGYSGFKTIIAYRTGL KISCNESKAFEDFYDKERDWFGKRAKGFRDFLVCKTLEIAKELKVPVQIHTGAGDRDIKFDLSLPSYLTDIVRKYEGKVV FVHAGYPYHRETAWMSYIFPSVYLDVSQFNPLAPLSAFNVIKEIFEVSPANKVLYGSDAFNVPEIAWLGAKLAKESFEEL RSEFLKRDLMSEEDLEVLKERFFYKNAEELYDF >Mature_353_residues MFKVIDDHAHWFSVKPLDEKGLALESAESWIEGEINADVVTMNLLKPFFLVLKHRLKKLLGENFIEERNRMIKDDPVNYV KFLFQDAKIEGMVIDEGFGKKEIEPPVKYKLLFRIEKIINDEMFKKPFDKAVEYFEESLREKIRTGYSGFKTIIAYRTGL KISCNESKAFEDFYDKERDWFGKRAKGFRDFLVCKTLEIAKELKVPVQIHTGAGDRDIKFDLSLPSYLTDIVRKYEGKVV FVHAGYPYHRETAWMSYIFPSVYLDVSQFNPLAPLSAFNVIKEIFEVSPANKVLYGSDAFNVPEIAWLGAKLAKESFEEL RSEFLKRDLMSEEDLEVLKERFFYKNAEELYDF
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41351; Mature: 41351
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKVIDDHAHWFSVKPLDEKGLALESAESWIEGEINADVVTMNLLKPFFLVLKHRLKKLL CCEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHH GENFIEERNRMIKDDPVNYVKFLFQDAKIEGMVIDEGFGKKEIEPPVKYKLLFRIEKIIN HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH DEMFKKPFDKAVEYFEESLREKIRTGYSGFKTIIAYRTGLKISCNESKAFEDFYDKERDW HHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH FGKRAKGFRDFLVCKTLEIAKELKVPVQIHTGAGDRDIKFDLSLPSYLTDIVRKYEGKVV HHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHCCCEE FVHAGYPYHRETAWMSYIFPSVYLDVSQFNPLAPLSAFNVIKEIFEVSPANKVLYGSDAF EEECCCCCHHHHHHHHHHHHHHHEEHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCC NVPEIAWLGAKLAKESFEELRSEFLKRDLMSEEDLEVLKERFFYKNAEELYDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure MFKVIDDHAHWFSVKPLDEKGLALESAESWIEGEINADVVTMNLLKPFFLVLKHRLKKLL CCEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHH GENFIEERNRMIKDDPVNYVKFLFQDAKIEGMVIDEGFGKKEIEPPVKYKLLFRIEKIIN HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH DEMFKKPFDKAVEYFEESLREKIRTGYSGFKTIIAYRTGLKISCNESKAFEDFYDKERDW HHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH FGKRAKGFRDFLVCKTLEIAKELKVPVQIHTGAGDRDIKFDLSLPSYLTDIVRKYEGKVV HHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHCCCEE FVHAGYPYHRETAWMSYIFPSVYLDVSQFNPLAPLSAFNVIKEIFEVSPANKVLYGSDAF EEECCCCCHHHHHHHHHHHHHHHEEHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCC NVPEIAWLGAKLAKESFEELRSEFLKRDLMSEEDLEVLKERFFYKNAEELYDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA