| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920217
Identifier: 15920217
GI number: 15920217
Start: 57094
End: 57552
Strand: Reverse
Name: 15920217
Synonym: ST0040
Alternate gene names: NA
Gene position: 57552-57094 (Counterclockwise)
Preceding gene: 15920218
Following gene: 15920216
Centisome position: 2.14
GC content: 33.99
Gene sequence:
>459_bases ATGAGTGAAATCCTTAAAAATGTTATAGACCCAGAGACTCTAAGCTCAATAGTCGATCTAGGATTTGTTAAACAAGTAGA GGAAGGAGAAAATAGGATAAGGGTAGTACTCTCTCCACCTACCTTTTGGTGTCCCCCAACATTCCTATACATGATCCTAG AGGATTTAAGAGAAAAATTAAAGAGTAAATACGAAATTATTGATATAGAGGTCATAGACCATCATGATAGTGAAAAATTA ACAAAATGTATAAATAAAGGGCTAAAATTTGACGAATGTTATAAAGATGAAACCATGAAAGATCTTTATGATGATTTGAA GAAGAGATTTTACCAAAGATTTGAAAGGGGAATGAGTCCGAAAAACAGATCGGACAAGCTAGTAAGATTATCCTTAGGTA TAACTGGAGAAATGTGTAAATTATTAGCTGAGGAGAGGATGAAACGTGAAGGCAGTTAG
Upstream 100 bases:
>100_bases GGTCTAATTTGCATCCCCTATCCTTATCTGTACCACGCAAAGAAATGCCTCATATTATGTCTCTAACAACCCTAGTTATA ACCATAGTGAGGTGTATTAA
Downstream 100 bases:
>100_bases AATTCATGAATATAATGCACCCTTACAATTAGATGAAGTAGATTATCCAAAAATAACTGGGCCTTATGATATTATAGTAA GAATAAAGGGTGCGGGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSEILKNVIDPETLSSIVDLGFVKQVEEGENRIRVVLSPPTFWCPPTFLYMILEDLREKLKSKYEIIDIEVIDHHDSEKL TKCINKGLKFDECYKDETMKDLYDDLKKRFYQRFERGMSPKNRSDKLVRLSLGITGEMCKLLAEERMKREGS
Sequences:
>Translated_152_residues MSEILKNVIDPETLSSIVDLGFVKQVEEGENRIRVVLSPPTFWCPPTFLYMILEDLREKLKSKYEIIDIEVIDHHDSEKL TKCINKGLKFDECYKDETMKDLYDDLKKRFYQRFERGMSPKNRSDKLVRLSLGITGEMCKLLAEERMKREGS >Mature_151_residues SEILKNVIDPETLSSIVDLGFVKQVEEGENRIRVVLSPPTFWCPPTFLYMILEDLREKLKSKYEIIDIEVIDHHDSEKLT KCINKGLKFDECYKDETMKDLYDDLKKRFYQRFERGMSPKNRSDKLVRLSLGITGEMCKLLAEERMKREGS
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17899; Mature: 17768
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEILKNVIDPETLSSIVDLGFVKQVEEGENRIRVVLSPPTFWCPPTFLYMILEDLREKL CHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH KSKYEIIDIEVIDHHDSEKLTKCINKGLKFDECYKDETMKDLYDDLKKRFYQRFERGMSP HHHHHEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KNRSDKLVRLSLGITGEMCKLLAEERMKREGS CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEILKNVIDPETLSSIVDLGFVKQVEEGENRIRVVLSPPTFWCPPTFLYMILEDLREKL HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH KSKYEIIDIEVIDHHDSEKLTKCINKGLKFDECYKDETMKDLYDDLKKRFYQRFERGMSP HHHHHEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KNRSDKLVRLSLGITGEMCKLLAEERMKREGS CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA