Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yieH [H]
Identifier: 15888132
GI number: 15888132
Start: 787140
End: 787829
Strand: Reverse
Name: yieH [H]
Synonym: Atu0790
Alternate gene names: 15888132
Gene position: 787829-787140 (Counterclockwise)
Preceding gene: 159185429
Following gene: 159184465
Centisome position: 27.73
GC content: 62.75
Gene sequence:
>690_bases ATGAGCGGCTTCGACCTCATTATTTTCGACTGCGACGGCGTTCTGGTCGACTCCGAAATCATCGCCGCCCAGGTGGAATC CCGCCTTTTGACCGAGGCCGGTTACCCGATCTCCGTCGAGGAAATGGGCGAGCGCTTCGCTGGCATGACCTGGAAGAACA TCCTCCTGCAGGTGGAAAGCGAAGCCAGCATTCCGCTCTCCGCATCGCTGCTCGACAAGTCTGAAAAGCTGCTCGACATG CGGCTGGAACGCGACGTGAAGATCATCGACGGCGTAAAGTTCGCGCTCTCGCGCCTGACGACGCCGCGCTGCATCTGCTC GAACTCCTCGAGCCACCGCCTCGACATGATGCTGACGAAGGTGGGCCTGAAACCCTATTTCGCGCCGCATATCTATTCCG CCAAGGATCTCGGCGCCGACCGCGTGAAGCCGAAGCCGGATATCTTCCTGCATGGCGCGGCGCAATTTGGCGTCTCGCCC GATCGGGTCGTCGTGGTCGAGGATTCCGTGCACGGCATTCACGGCGCGAGAGCCGCCGGCATGCGCGTCATCGGCTTCAC CGGCGCATCCCACACCTATCCGAGCCACGCCGACCGGCTGACGGATGCGGGTGCGGAAACGGTGATCTCGCGCATGCAGG ACCTGCCGGCCGTGATCGCGGCGATGGCGGAGTGGGAAGGCGCTTTTTGA
Upstream 100 bases:
>100_bases GGGACCGACCCTTGCGGGCGAACCGGTTGAGCTTGGCGCGGACATGGTCTAAAAGCCCGGCATCATTTTCTTCCGAGCAA ATCCGATAAAGGGAGCGCCC
Downstream 100 bases:
>100_bases GGAGGTAAATGTGGTCACATCCCAGACGCAAAAGGAATTCCGACCCGGCTGTGGTTATACCGAAGCGGACTGGGATGCGA TCGACTTTCCTGAGATGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLLDM RLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP DRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEWEGAF
Sequences:
>Translated_229_residues MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLLDM RLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP DRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEWEGAF >Mature_228_residues SGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLLDMR LERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPD RVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEWEGAF
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=195, Percent_Identity=30.2564102564103, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789046, Length=184, Percent_Identity=30.4347826086957, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI116008157, Length=188, Percent_Identity=30.3191489361702, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI20129151, Length=230, Percent_Identity=26.9565217391304, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24905; Mature: 24774
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVES CCCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHEEEEECC EASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAG HCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECHHHCCCCCCEEEEEECCCCCCCCCHHCC MRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEWEGAF EEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVES CCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHEEEEECC EASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAG HCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECHHHCCCCCCEEEEEECCCCCCCCCHHCC MRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEWEGAF EEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]