Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185419

Identifier: 159185419

GI number: 159185419

Start: 940187

End: 940711

Strand: Direct

Name: 159185419

Synonym: Atu8088

Alternate gene names: NA

Gene position: 940187-940711 (Clockwise)

Preceding gene: 15888288

Following gene: 159184549

Centisome position: 33.09

GC content: 62.67

Gene sequence:

>525_bases
ATGACAAGTTCCCACACTTACGACCCGGCGCTCTACGGAGCCTGGCCGGAGACGCCCGCTTATGCCGACGATGACATGCC
GGAAGCCGCCCCCGAAATAAAATCGCGGGCCGACAGGCTGGCCGCCGAGGATGCGGCGCGTAATGGCAATCTGCGACAAT
TGCTGAATGAGCTGACAGAGGAGATGCGCCAGCAATTCTCGATGTACCGCAATATGCGGGAGGCGGGCGAGGCGGGGCTT
TTGCCCGATGCCGATGATGCGCAGGCCAAGCAGGCGCGCGCCGATGTGAAAATCGCAACGGATCAGCTGTCGCTCATCGT
CCGCACGCTGGAACGGATCGATGCCCTGCAACGGGTGTTGGCGCAGGAACGGCAGGCGCTTATGGCCGAGGATGAAACCG
AGACCGAGGACTACGAGGCGGCGGTGGCGCATTTCCTTGGACGCATCGACGATTTGGCCGAGCAGAAATGCCGAGAGAGG
CTGGAGGCGATCGCTGCGTTGGGCACTTCCGTCGGGTCTGGCTGA

Upstream 100 bases:

>100_bases
TTACAGCGTGACGGTGGTTTGGTAGTGTTTGGGTACGGTCGGAGATTTGCGGGCAAAGCTGCCTTGTGTCTCTCGATATA
ATCACTCCCAGGCCAATCCC

Downstream 100 bases:

>100_bases
GGCATGGCGGAATTTTTGACTGAAACCCGCTTGCAGGGACAGGTCTTCAACCTCCTGCGCGACTGGCGTTTCATCGGCAA
CCTGCCGCAGCAGGCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTSSHTYDPALYGAWPETPAYADDDMPEAAPEIKSRADRLAAEDAARNGNLRQLLNELTEEMRQQFSMYRNMREAGEAGL
LPDADDAQAKQARADVKIATDQLSLIVRTLERIDALQRVLAQERQALMAEDETETEDYEAAVAHFLGRIDDLAEQKCRER
LEAIAALGTSVGSG

Sequences:

>Translated_174_residues
MTSSHTYDPALYGAWPETPAYADDDMPEAAPEIKSRADRLAAEDAARNGNLRQLLNELTEEMRQQFSMYRNMREAGEAGL
LPDADDAQAKQARADVKIATDQLSLIVRTLERIDALQRVLAQERQALMAEDETETEDYEAAVAHFLGRIDDLAEQKCRER
LEAIAALGTSVGSG
>Mature_173_residues
TSSHTYDPALYGAWPETPAYADDDMPEAAPEIKSRADRLAAEDAARNGNLRQLLNELTEEMRQQFSMYRNMREAGEAGLL
PDADDAQAKQARADVKIATDQLSLIVRTLERIDALQRVLAQERQALMAEDETETEDYEAAVAHFLGRIDDLAEQKCRERL
EAIAALGTSVGSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19270; Mature: 19138

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSHTYDPALYGAWPETPAYADDDMPEAAPEIKSRADRLAAEDAARNGNLRQLLNELTE
CCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EMRQQFSMYRNMREAGEAGLLPDADDAQAKQARADVKIATDQLSLIVRTLERIDALQRVL
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQERQALMAEDETETEDYEAAVAHFLGRIDDLAEQKCRERLEAIAALGTSVGSG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSSHTYDPALYGAWPETPAYADDDMPEAAPEIKSRADRLAAEDAARNGNLRQLLNELTE
CCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EMRQQFSMYRNMREAGEAGLLPDADDAQAKQARADVKIATDQLSLIVRTLERIDALQRVL
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQERQALMAEDETETEDYEAAVAHFLGRIDDLAEQKCRERLEAIAALGTSVGSG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA