Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185417
Identifier: 159185417
GI number: 159185417
Start: 636820
End: 637329
Strand: Reverse
Name: 159185417
Synonym: Atu8084
Alternate gene names: NA
Gene position: 637329-636820 (Counterclockwise)
Preceding gene: 159184405
Following gene: 159184404
Centisome position: 22.43
GC content: 62.16
Gene sequence:
>510_bases ATGCAGCGTCTTTTTCTGACAGCGATTGTCGTGCTGACCAGCGGGTCGGCGATGGCGTCCTCCATCGAATATATCAATGA CGTGCAAGTCACCAATGGCAGCTTCGTTCGCCTGAATTGCGCCGGCTGCCAGCCGCTGAAAAACAAACCCGCGGCGCAGG GTTATGCCGTTCCATCCATCGAGCCAGGCACGCAGCACACTGAAATGCACGAGGTCGATGGCAAACGCACGCTGGTGCGC ACCGAAGCCTGGCTTGGCGGTGCGCCGGTCACCTTCGTCAGCACCAATCCCGCATGGATGACGGACCCCTCCGGCACCGT CATCGCAACCTATGACGACGCGGCACCCGAGGCACATCCCGCTGAAACGGCGTCAACGCCGGCCGGCATCGACGTGACGG CGACCACGGCAGCCGTCAACGCAATCTCCAGCGACAATGCATCCAAGCCGGCCAACGCCTCGGTGATCGACACGCCCCAG TTCCCGGATTTCCAGTTGCGCGGCAACTGA
Upstream 100 bases:
>100_bases GCTGACCCGATGGAAACGAAAGACCGGTAATACTTGCCCCATTATTGCATGGCGCATTGTGTCTCGATTGCGAGGCCGCG CCGTCATTTCGGGGGTTTCG
Downstream 100 bases:
>100_bases TCCGCCAGCGGCGCTTTTGACGACAAACGTCAAATAATCGCGCTTTCGCTGCATTCTCCAAGAAATGCCGCAACCATGCG GGGAATATTACTTTCTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MQRLFLTAIVVLTSGSAMASSIEYINDVQVTNGSFVRLNCAGCQPLKNKPAAQGYAVPSIEPGTQHTEMHEVDGKRTLVR TEAWLGGAPVTFVSTNPAWMTDPSGTVIATYDDAAPEAHPAETASTPAGIDVTATTAAVNAISSDNASKPANASVIDTPQ FPDFQLRGN
Sequences:
>Translated_169_residues MQRLFLTAIVVLTSGSAMASSIEYINDVQVTNGSFVRLNCAGCQPLKNKPAAQGYAVPSIEPGTQHTEMHEVDGKRTLVR TEAWLGGAPVTFVSTNPAWMTDPSGTVIATYDDAAPEAHPAETASTPAGIDVTATTAAVNAISSDNASKPANASVIDTPQ FPDFQLRGN >Mature_169_residues MQRLFLTAIVVLTSGSAMASSIEYINDVQVTNGSFVRLNCAGCQPLKNKPAAQGYAVPSIEPGTQHTEMHEVDGKRTLVR TEAWLGGAPVTFVSTNPAWMTDPSGTVIATYDDAAPEAHPAETASTPAGIDVTATTAAVNAISSDNASKPANASVIDTPQ FPDFQLRGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17662; Mature: 17662
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLFLTAIVVLTSGSAMASSIEYINDVQVTNGSFVRLNCAGCQPLKNKPAAQGYAVPSI CCHHHEEEEEEHCCCCHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCC EPGTQHTEMHEVDGKRTLVRTEAWLGGAPVTFVSTNPAWMTDPSGTVIATYDDAAPEAHP CCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCEEECCCCCEEEEECCCCCCCCC AETASTPAGIDVTATTAAVNAISSDNASKPANASVIDTPQFPDFQLRGN CCCCCCCCCCEEEEHHHEEEECCCCCCCCCCCCEEEECCCCCCEEEECC >Mature Secondary Structure MQRLFLTAIVVLTSGSAMASSIEYINDVQVTNGSFVRLNCAGCQPLKNKPAAQGYAVPSI CCHHHEEEEEEHCCCCHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCC EPGTQHTEMHEVDGKRTLVRTEAWLGGAPVTFVSTNPAWMTDPSGTVIATYDDAAPEAHP CCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCEEECCCCCEEEEECCCCCCCCC AETASTPAGIDVTATTAAVNAISSDNASKPANASVIDTPQFPDFQLRGN CCCCCCCCCCEEEEHHHEEEECCCCCCCCCCCCEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA