Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is mosC [H]
Identifier: 159185348
GI number: 159185348
Start: 2709588
End: 2710778
Strand: Reverse
Name: mosC [H]
Synonym: Atu2724
Alternate gene names: 159185348
Gene position: 2710778-2709588 (Counterclockwise)
Preceding gene: 15889977
Following gene: 159185347
Centisome position: 95.4
GC content: 61.29
Gene sequence:
>1191_bases ATGAATGGCCCCACGACATTTTCACCGACAGGCACTCGCTCATCCTATCTGACGCGGCACAGGCTTGGCGTTTCGCTGCT GTTTTTGATGAACGGCTTCATGATGGGGTCATGGGCACCGAAGATTCCGGAATTTGCCGCACGCCTGTCCCTCAGCGAAA GTGCGCTCGGCCTGATCATTCTGGTTTTCGGTATCGGTTCGCTGGTTTTCATGCCGATTGCCGGGTCGCAGATCGCCCGT TTCGGCTCGCGCACGGTGAGCCTTGTCACCGCCGCGATCTTCCTGCCGACGCTGCTTTTCATCTCTTGGGCCGGCACCGT CTGGGCAGGGGTGATTGCGGTTTTCCTGTTCGGCGGGCTGACGGGGGCGATGGATGTCGCGATGAACGCCAATGCCGTGG CGGTGGAGCGCGATATGCGTCGGGCGATCATGTCGTCCTGTCATGCCTTCTGGAGCCTCGGCGGCCTCATCGGGGCCGGT CTCGGCGGTTATCTCATCACCGCTATCGGCGTACAGGGTCACGCGATTGCACTCACCATCATCGCGCTCGTGCTTCTGGT CATTGCGTGGCCGCGGGTTCTGGCGGATCGCCCGCACCCCGAGGAGGAGCGCCCGAAAGGTGGCCTGCCACTGACGCCGC TGCCGTGGATCATCGGCCTGATGGCGCTGTTCTCGATGATCCCGGAAGGTGCTATCCTCGACTGGGGTGCGCTTTATCTG CGCAATGAACTCGGCGCTTCCGTATCGCAGTCCGGTTTTGCCTTCGCAGCCTTTTCCATGACCATGGCGGCGATGCGGTT TGCCGGCGATCTGGTGCGTGACAAGTTCGGCGCGGTCAACACTCTGCGGTTCTGCTCGGCCATGTCGATCATCGGCCTCA TCATTGCCGGTGTTGCGGGCAATTCCACCATCGCCATCATCGGTTTCGCGATTGCCGGCATCGGCATTTCCAACATGGTG CCCATCGCCTTTTCGGCCGCAGGCAATATGCCGGGGCTGGCACCGGGAATCGGCCTTTCGGTCGTTACCACCATGGGTTA CTCCGGTATCTTGGTGGCACCGTCCGCCATCGGCTTCATTGCCGAACATACCGGCCTTGCCAGTGTCTTCATGGCGCTGC CTCTGCTGCATGTGGTGGTTTTGCTGCTTTCGCGGCTCGCTCGCCATGCGGATGGTGCTGGCAAGGAATAG
Upstream 100 bases:
>100_bases TGCATTGGTCGAGTCGCTTTCGGCACAAGGCGTAGACGTTTATTGCGGCGAAGATGACGCTGCCCCGTTTTCTCATGGTC AAGTCTGAAGGATATTGCCG
Downstream 100 bases:
>100_bases GCGTCTCGAATTTTGCCATGATTGCGGTAAAGTAGAAGCTCCAGCGCGTTGGGTGTTGACAAGCAAGCCCCCTTGTTTCA CCTCAATTGCAAGACCTTGC
Product: MFS permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MNGPTTFSPTGTRSSYLTRHRLGVSLLFLMNGFMMGSWAPKIPEFAARLSLSESALGLIILVFGIGSLVFMPIAGSQIAR FGSRTVSLVTAAIFLPTLLFISWAGTVWAGVIAVFLFGGLTGAMDVAMNANAVAVERDMRRAIMSSCHAFWSLGGLIGAG LGGYLITAIGVQGHAIALTIIALVLLVIAWPRVLADRPHPEEERPKGGLPLTPLPWIIGLMALFSMIPEGAILDWGALYL RNELGASVSQSGFAFAAFSMTMAAMRFAGDLVRDKFGAVNTLRFCSAMSIIGLIIAGVAGNSTIAIIGFAIAGIGISNMV PIAFSAAGNMPGLAPGIGLSVVTTMGYSGILVAPSAIGFIAEHTGLASVFMALPLLHVVVLLLSRLARHADGAGKE
Sequences:
>Translated_396_residues MNGPTTFSPTGTRSSYLTRHRLGVSLLFLMNGFMMGSWAPKIPEFAARLSLSESALGLIILVFGIGSLVFMPIAGSQIAR FGSRTVSLVTAAIFLPTLLFISWAGTVWAGVIAVFLFGGLTGAMDVAMNANAVAVERDMRRAIMSSCHAFWSLGGLIGAG LGGYLITAIGVQGHAIALTIIALVLLVIAWPRVLADRPHPEEERPKGGLPLTPLPWIIGLMALFSMIPEGAILDWGALYL RNELGASVSQSGFAFAAFSMTMAAMRFAGDLVRDKFGAVNTLRFCSAMSIIGLIIAGVAGNSTIAIIGFAIAGIGISNMV PIAFSAAGNMPGLAPGIGLSVVTTMGYSGILVAPSAIGFIAEHTGLASVFMALPLLHVVVLLLSRLARHADGAGKE >Mature_396_residues MNGPTTFSPTGTRSSYLTRHRLGVSLLFLMNGFMMGSWAPKIPEFAARLSLSESALGLIILVFGIGSLVFMPIAGSQIAR FGSRTVSLVTAAIFLPTLLFISWAGTVWAGVIAVFLFGGLTGAMDVAMNANAVAVERDMRRAIMSSCHAFWSLGGLIGAG LGGYLITAIGVQGHAIALTIIALVLLVIAWPRVLADRPHPEEERPKGGLPLTPLPWIIGLMALFSMIPEGAILDWGALYL RNELGASVSQSGFAFAAFSMTMAAMRFAGDLVRDKFGAVNTLRFCSAMSIIGLIIAGVAGNSTIAIIGFAIAGIGISNMV PIAFSAAGNMPGLAPGIGLSVVTTMGYSGILVAPSAIGFIAEHTGLASVFMALPLLHVVVLLLSRLARHADGAGKE
Specific function: May be a membrane transport protein that could either transport a precursor for rhizopine biosynthesis into bacteroids or the finished product from the bacteroids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787068, Length=365, Percent_Identity=29.8630136986301, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41189; Mature: 41189
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPTTFSPTGTRSSYLTRHRLGVSLLFLMNGFMMGSWAPKIPEFAARLSLSESALGLII CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHCCCHHHHHHHH LVFGIGSLVFMPIAGSQIARFGSRTVSLVTAAIFLPTLLFISWAGTVWAGVIAVFLFGGL HHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH TGAMDVAMNANAVAVERDMRRAIMSSCHAFWSLGGLIGAGLGGYLITAIGVQGHAIALTI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHH IALVLLVIAWPRVLADRPHPEEERPKGGLPLTPLPWIIGLMALFSMIPEGAILDWGALYL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHH RNELGASVSQSGFAFAAFSMTMAAMRFAGDLVRDKFGAVNTLRFCSAMSIIGLIIAGVAG HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC NSTIAIIGFAIAGIGISNMVPIAFSAAGNMPGLAPGIGLSVVTTMGYSGILVAPSAIGFI CCEEEHHHHHHHHCCHHCCCCHHEECCCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHHH AEHTGLASVFMALPLLHVVVLLLSRLARHADGAGKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNGPTTFSPTGTRSSYLTRHRLGVSLLFLMNGFMMGSWAPKIPEFAARLSLSESALGLII CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHCCCHHHHHHHH LVFGIGSLVFMPIAGSQIARFGSRTVSLVTAAIFLPTLLFISWAGTVWAGVIAVFLFGGL HHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH TGAMDVAMNANAVAVERDMRRAIMSSCHAFWSLGGLIGAGLGGYLITAIGVQGHAIALTI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHH IALVLLVIAWPRVLADRPHPEEERPKGGLPLTPLPWIIGLMALFSMIPEGAILDWGALYL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHH RNELGASVSQSGFAFAAFSMTMAAMRFAGDLVRDKFGAVNTLRFCSAMSIIGLIIAGVAG HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC NSTIAIIGFAIAGIGISNMVPIAFSAAGNMPGLAPGIGLSVVTTMGYSGILVAPSAIGFI CCEEEHHHHHHHHCCHHCCCCHHEECCCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHHH AEHTGLASVFMALPLLHVVVLLLSRLARHADGAGKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8349559; 7551036 [H]