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The map label for this gene is yhcM [H]

Identifier: 159185306

GI number: 159185306

Start: 2625936

End: 2627099

Strand: Reverse

Name: yhcM [H]

Synonym: Atu2640

Alternate gene names: 159185306

Gene position: 2627099-2625936 (Counterclockwise)

Preceding gene: 15889897

Following gene: 159185305

Centisome position: 92.45

GC content: 57.99

Gene sequence:

>1164_bases
ATGAAGCCATTGCCTGATTACAATCATAGTGTCGTTGAACAACTCAACGCATTGACGGCAGCTGGCACCTTGCAGGCCGA
TGCCGCCCAGCTGGGGGTCGCGGCTCATCTCGACCGCATTCTTGCCGATCTGAAGGCGCGCAAGCCCGCCAGGAAAAAAA
GCGCGCTCGGCTGGATGTTCGCGCGCAAGGCCGGGCCCGCCGCCTTCGTCAAGGGATTATATGTTCATGGCAGCGTCGGC
CGCGGCAAGACGATGCTGATGGACATGTTCTACGAGATGGCGCCCGTCTCTTCGAAACGGCGTTGTCATTTCCACGAATT
CATGGCGGATGTGCATAATCGCGTGCATACGCACCGGCAGAAACTGAAAAATGGCGAGACCAAACAGGCCGATCCCATTC
CGCCCGTCGCGGCCCAGCTTCTGGCGGAAGCAGAGCTTCTGTGCTTCGACGAGTTCACCGTCACGGATATTGCCGATGCA
ATGATCCTCGCCCGGCTGTTCAGCGAGCTTTTCGCCAATGGTTGCACATTGGTGACGACCTCCAACGTGGTGCCTGACAA
TCTCTACAAGGACGGGCTCAATCGCGGCCTGTTTCTGCCCTTCGTCGATCTGCTGAAAAAATATGTTGAGGTGGTAACTC
TGGACAGCCCGACAGACTACCGGATGGAGAAGCTGGAGAGCCTGCCAGTCTATATCACGCCGCTCGACGGTTCAGCGGAT
CAGGCGATGGATATGGCATGGCGGCACATGACTGCCGGCCATCTCGTCGCGCCGACTGAGATACCCATGAAGGGCCGTTC
CATTCTGGTGCCGCGCGCCAGCGGCCGGGTTGCCCGTTTTTCCTTTTCCGACCTTTGCGAAAAGCCGCTCGGAGCTTCCG
ACTTTCTCGCCATCGCCAATCGTTTCGATACGGTCTTCATCGATCACATTCCGCTTCTCAATGCCGACAAGCGTAACGAG
ACGAAGCGCTTTATCATCCTCATCGATGCGCTTTACGATCACACCGTCAGGCTTTTCGCCTCTGCCGCCGCCATGCCGGA
AGACCTGCTGGGCAAGCGCAAGGGGACAGAAGGTTTCGAGTTCGATCGCACCGCCTCGCGCCTGTTTGAGATGCGCAGCG
CCGATTACCTGGCGCTCCACCACGAAAAGCGGCAGAAAGTTTGA

Upstream 100 bases:

>100_bases
GCCGATGAGCCTATCCGGTGCAGCCGGATCGCTTCGCTTGTTCTGAGCCATTCCATTCCTCGCGGGTGCTTTGCTGCGCC
CGCGACCGGAGCGCTTTTTC

Downstream 100 bases:

>100_bases
CACTTTCGTGACGCATTATCTTACGTTTACGTAAGAAAATAATGATCTAAACGATTGAAAATACTCATCAGAAAAGAATC
TGTTGCCAATTTTGGCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKPLPDYNHSVVEQLNALTAAGTLQADAAQLGVAAHLDRILADLKARKPARKKSALGWMFARKAGPAAFVKGLYVHGSVG
RGKTMLMDMFYEMAPVSSKRRCHFHEFMADVHNRVHTHRQKLKNGETKQADPIPPVAAQLLAEAELLCFDEFTVTDIADA
MILARLFSELFANGCTLVTTSNVVPDNLYKDGLNRGLFLPFVDLLKKYVEVVTLDSPTDYRMEKLESLPVYITPLDGSAD
QAMDMAWRHMTAGHLVAPTEIPMKGRSILVPRASGRVARFSFSDLCEKPLGASDFLAIANRFDTVFIDHIPLLNADKRNE
TKRFIILIDALYDHTVRLFASAAAMPEDLLGKRKGTEGFEFDRTASRLFEMRSADYLALHHEKRQKV

Sequences:

>Translated_387_residues
MKPLPDYNHSVVEQLNALTAAGTLQADAAQLGVAAHLDRILADLKARKPARKKSALGWMFARKAGPAAFVKGLYVHGSVG
RGKTMLMDMFYEMAPVSSKRRCHFHEFMADVHNRVHTHRQKLKNGETKQADPIPPVAAQLLAEAELLCFDEFTVTDIADA
MILARLFSELFANGCTLVTTSNVVPDNLYKDGLNRGLFLPFVDLLKKYVEVVTLDSPTDYRMEKLESLPVYITPLDGSAD
QAMDMAWRHMTAGHLVAPTEIPMKGRSILVPRASGRVARFSFSDLCEKPLGASDFLAIANRFDTVFIDHIPLLNADKRNE
TKRFIILIDALYDHTVRLFASAAAMPEDLLGKRKGTEGFEFDRTASRLFEMRSADYLALHHEKRQKV
>Mature_387_residues
MKPLPDYNHSVVEQLNALTAAGTLQADAAQLGVAAHLDRILADLKARKPARKKSALGWMFARKAGPAAFVKGLYVHGSVG
RGKTMLMDMFYEMAPVSSKRRCHFHEFMADVHNRVHTHRQKLKNGETKQADPIPPVAAQLLAEAELLCFDEFTVTDIADA
MILARLFSELFANGCTLVTTSNVVPDNLYKDGLNRGLFLPFVDLLKKYVEVVTLDSPTDYRMEKLESLPVYITPLDGSAD
QAMDMAWRHMTAGHLVAPTEIPMKGRSILVPRASGRVARFSFSDLCEKPLGASDFLAIANRFDTVFIDHIPLLNADKRNE
TKRFIILIDALYDHTVRLFASAAAMPEDLLGKRKGTEGFEFDRTASRLFEMRSADYLALHHEKRQKV

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=405, Percent_Identity=38.2716049382716, Blast_Score=265, Evalue=6e-71,
Organism=Escherichia coli, GI1789627, Length=367, Percent_Identity=35.4223433242507, Blast_Score=221, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17505769, Length=403, Percent_Identity=35.2357320099256, Blast_Score=238, Evalue=6e-63,
Organism=Saccharomyces cerevisiae, GI6320783, Length=404, Percent_Identity=34.1584158415842, Blast_Score=202, Evalue=1e-52,
Organism=Drosophila melanogaster, GI20129913, Length=433, Percent_Identity=35.1039260969977, Blast_Score=228, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 43231; Mature: 43231

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLPDYNHSVVEQLNALTAAGTLQADAAQLGVAAHLDRILADLKARKPARKKSALGWMF
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ARKAGPAAFVKGLYVHGSVGRGKTMLMDMFYEMAPVSSKRRCHFHEFMADVHNRVHTHRQ
HHHCCHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
KLKNGETKQADPIPPVAAQLLAEAELLCFDEFTVTDIADAMILARLFSELFANGCTLVTT
HHHCCCCCCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
SNVVPDNLYKDGLNRGLFLPFVDLLKKYVEVVTLDSPTDYRMEKLESLPVYITPLDGSAD
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCEEEEECCCCHH
QAMDMAWRHMTAGHLVAPTEIPMKGRSILVPRASGRVARFSFSDLCEKPLGASDFLAIAN
HHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCCEEECCHHHHHCCCCCCHHHHHHHH
RFDTVFIDHIPLLNADKRNETKRFIILIDALYDHTVRLFASAAAMPEDLLGKRKGTEGFE
HHCEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
FDRTASRLFEMRSADYLALHHEKRQKV
HHHHHHHHHHHHCCCHHEEECHHHCCC
>Mature Secondary Structure
MKPLPDYNHSVVEQLNALTAAGTLQADAAQLGVAAHLDRILADLKARKPARKKSALGWMF
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ARKAGPAAFVKGLYVHGSVGRGKTMLMDMFYEMAPVSSKRRCHFHEFMADVHNRVHTHRQ
HHHCCHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
KLKNGETKQADPIPPVAAQLLAEAELLCFDEFTVTDIADAMILARLFSELFANGCTLVTT
HHHCCCCCCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
SNVVPDNLYKDGLNRGLFLPFVDLLKKYVEVVTLDSPTDYRMEKLESLPVYITPLDGSAD
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCEEEEECCCCHH
QAMDMAWRHMTAGHLVAPTEIPMKGRSILVPRASGRVARFSFSDLCEKPLGASDFLAIAN
HHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCCEEECCHHHHHCCCCCCHHHHHHHH
RFDTVFIDHIPLLNADKRNETKRFIILIDALYDHTVRLFASAAAMPEDLLGKRKGTEGFE
HHCEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
FDRTASRLFEMRSADYLALHHEKRQKV
HHHHHHHHHHHHCCCHHEEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]