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The map label for this gene is omp19

Identifier: 15889897

GI number: 15889897

Start: 2627192

End: 2627734

Strand: Reverse

Name: omp19

Synonym: Atu2641

Alternate gene names: 15889897

Gene position: 2627734-2627192 (Counterclockwise)

Preceding gene: 15889898

Following gene: 159185306

Centisome position: 92.47

GC content: 62.62

Gene sequence:

>543_bases
ATGCAATTCAGATATGTGGTGACGGGCCTAGCGGTTGTGATGAGCCTTGCCGGTTGCCAACGTACCTCCTACGATTACAA
CAATAACGGCAGCAACAATCCCGGTTATACACCGCCGTTGCAGGCGCAGCCGGTGCCCTCGGTCCAGTCCGGCGCCTTGC
CGCCGCCTGATGGCGCTTCCGGCAGCCAGTTCCCATCGGCGCCTGCATCCGCAGCACCTGGCGGCGTGAATGTCGCTTCT
GCTGCTCCTCCGGCAACGGCGCTCGACGTGACCAAGGAATCCATGGTTGGCAACTGGCGCGTTTCCAATGGCGGTGCCAA
TTGCGACATGTTCCTGACGCTCACCAACCTCGGCAGCGGTTCGCGTGGCGGCACGCGTGGTTGCTCGGGTGAGCTGACGG
CAATGGGTTCCTGGGAAGTGTCCGGCAAGATGGTCCTCTTCAAGAACCGTTCGGGCGATACGATCGGCCGCGTCTACAAG
AGCGCCGATGCGCGCTTCGACGGCACGACCAATAGCGGCCAGCCGCTCAGCCTCAGCCGATGA

Upstream 100 bases:

>100_bases
TTATCCCGGCCATCGCTTGCGCAAGGTAAGGCTTTGGTAATAATTCAGCCTTCTTGTTTGATCATGGTCTTTCCGGAAGC
GAGAGAATCGGGAGCTTGAT

Downstream 100 bases:

>100_bases
GCCTATCCGGTGCAGCCGGATCGCTTCGCTTGTTCTGAGCCATTCCATTCCTCGCGGGTGCTTTGCTGCGCCCGCGACCG
GAGCGCTTTTTCATGAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MQFRYVVTGLAVVMSLAGCQRTSYDYNNNGSNNPGYTPPLQAQPVPSVQSGALPPPDGASGSQFPSAPASAAPGGVNVAS
AAPPATALDVTKESMVGNWRVSNGGANCDMFLTLTNLGSGSRGGTRGCSGELTAMGSWEVSGKMVLFKNRSGDTIGRVYK
SADARFDGTTNSGQPLSLSR

Sequences:

>Translated_180_residues
MQFRYVVTGLAVVMSLAGCQRTSYDYNNNGSNNPGYTPPLQAQPVPSVQSGALPPPDGASGSQFPSAPASAAPGGVNVAS
AAPPATALDVTKESMVGNWRVSNGGANCDMFLTLTNLGSGSRGGTRGCSGELTAMGSWEVSGKMVLFKNRSGDTIGRVYK
SADARFDGTTNSGQPLSLSR
>Mature_180_residues
MQFRYVVTGLAVVMSLAGCQRTSYDYNNNGSNNPGYTPPLQAQPVPSVQSGALPPPDGASGSQFPSAPASAAPGGVNVAS
AAPPATALDVTKESMVGNWRVSNGGANCDMFLTLTNLGSGSRGGTRGCSGELTAMGSWEVSGKMVLFKNRSGDTIGRVYK
SADARFDGTTNSGQPLSLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp19 lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMP19_AGRT5 (Q8UC57)

Other databases:

- EMBL:   AE007869
- PIR:   AH2900
- PIR:   B97676
- RefSeq:   NP_355578.1
- STRING:   Q8UC57
- GeneID:   1134679
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu2641
- eggNOG:   NOG28507
- HOGENOM:   HBG348791
- OMA:   LAKVSAW
- ProtClustDB:   CLSK800614
- BioCyc:   ATUM176299-1:ATU2641-MONOMER
- InterPro:   IPR003086
- InterPro:   IPR021140
- InterPro:   IPR010571
- InterPro:   IPR016085
- Gene3D:   G3DSA:2.40.128.10
- PIRSF:   PIRSF034005

Pfam domain/function: PF02974 Inh; SSF50882 Protease_inh_b-brl

EC number: NA

Molecular weight: Translated: 18413; Mature: 18413

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFRYVVTGLAVVMSLAGCQRTSYDYNNNGSNNPGYTPPLQAQPVPSVQSGALPPPDGAS
CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSQFPSAPASAAPGGVNVASAAPPATALDVTKESMVGNWRVSNGGANCDMFLTLTNLGSG
CCCCCCCCCCCCCCCCEECCCCCCCCEEHHHHHHHCCCEEECCCCCCEEEEEEEECCCCC
SRGGTRGCSGELTAMGSWEVSGKMVLFKNRSGDTIGRVYKSADARFDGTTNSGQPLSLSR
CCCCCCCCCCCEEEECCEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure
MQFRYVVTGLAVVMSLAGCQRTSYDYNNNGSNNPGYTPPLQAQPVPSVQSGALPPPDGAS
CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSQFPSAPASAAPGGVNVASAAPPATALDVTKESMVGNWRVSNGGANCDMFLTLTNLGSG
CCCCCCCCCCCCCCCCEECCCCCCCCEEHHHHHHHCCCEEECCCCCCEEEEEEEECCCCC
SRGGTRGCSGELTAMGSWEVSGKMVLFKNRSGDTIGRVYKSADARFDGTTNSGQPLSLSR
CCCCCCCCCCCEEEECCEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194