| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
|---|---|
| Accession | NC_003062 |
| Length | 2,841,580 |
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The map label for this gene is 159185272
Identifier: 159185272
GI number: 159185272
Start: 2543770
End: 2544465
Strand: Direct
Name: 159185272
Synonym: Atu2573
Alternate gene names: NA
Gene position: 2543770-2544465 (Clockwise)
Preceding gene: 15889829
Following gene: 159185273
Centisome position: 89.52
GC content: 59.77
Gene sequence:
>696_bases ATGAAGAGCTTTCCGCAGCTCGCCGGCACGGTCCATTCCTTCTGCGGCTGCGAACTCGACCATGTCAGCCTGCTGAAATC AATGGATGAGGGTGGCGACTGGACCAAGGACCAGAAAGCCACCGACATCGTGTTGACGCCGGCGGCCTGCTACCCGCTAT ATCCGACGATCGCCAAACGTGGTGCCCTTCCCGCCGGCGGCGGTCTCTATGACATCCAGTCTTATTGCTTCCGCCATGAA CCCTCCAAGGATCCCGCCCGCCAGCAGCTTTTCCGCATGCGCGAATATGTCTGCATGGGCACTGAGTCCGACGTCACCGA ATTCCGCCAGACCTGGATGGATCGTGGCGTGGAGATGATGAAGGCAGTCGGCCTCGACGTCACCATCGATATTGCCAACG ATCCTTTCTTTGGCCGCGCCGGCAAGATGCTGGCCAACAACCAGCGCGACCAGAACCTGAAATTCGAGCTACTGATCCCG GTCACGTCAGCAACCAACCCGACGGCCTGCATGAGCTTCAATTACCATCAGGATGCCTTCGGCCAGAAATGGGGCCTGAA CCTCGAAAATGGCGATGTCGCCCACACCGCCTGCGTCGGGTTCGGGCTGGAGCGCATCGCGCTGGCGCTGTTTGCGCATC ACGGTCTCGACGTGAAGAAATGGCCTGCAAAGGTCGTGGAAACCCTCTGGGGCTGA
Upstream 100 bases:
>100_bases ATTCGAGCGGCTGATCGACCGCACGGGTGGCGCCGATGGCGCTGAAGCGATCCGTTTTCCGCCGGGCATCAACCGCGCCT ATTTCGAAAAGAGCGGTTAC
Downstream 100 bases:
>100_bases TTATCCATGCGGCAGATTTTTCCGGGCCTCGATCCCAACACCTATGTGCAGCATCCGCTTCATTCCTCCGAAAGAATGTG GCCGGAGACCAATTGCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: Amino acid:[carrier-protein] ligase [AMP forming]; aa:CP ligase; Aminoacyl-[acyl-carrier-protein] synthetase; L-alanine:[acyl-carrier-protein] ligase; L-glycine:[acyl-carrier-protein] ligase; L-serine:[acyl-carrier-protein] ligase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKSFPQLAGTVHSFCGCELDHVSLLKSMDEGGDWTKDQKATDIVLTPAACYPLYPTIAKRGALPAGGGLYDIQSYCFRHE PSKDPARQQLFRMREYVCMGTESDVTEFRQTWMDRGVEMMKAVGLDVTIDIANDPFFGRAGKMLANNQRDQNLKFELLIP VTSATNPTACMSFNYHQDAFGQKWGLNLENGDVAHTACVGFGLERIALALFAHHGLDVKKWPAKVVETLWG
Sequences:
>Translated_231_residues MKSFPQLAGTVHSFCGCELDHVSLLKSMDEGGDWTKDQKATDIVLTPAACYPLYPTIAKRGALPAGGGLYDIQSYCFRHE PSKDPARQQLFRMREYVCMGTESDVTEFRQTWMDRGVEMMKAVGLDVTIDIANDPFFGRAGKMLANNQRDQNLKFELLIP VTSATNPTACMSFNYHQDAFGQKWGLNLENGDVAHTACVGFGLERIALALFAHHGLDVKKWPAKVVETLWG >Mature_231_residues MKSFPQLAGTVHSFCGCELDHVSLLKSMDEGGDWTKDQKATDIVLTPAACYPLYPTIAKRGALPAGGGLYDIQSYCFRHE PSKDPARQQLFRMREYVCMGTESDVTEFRQTWMDRGVEMMKAVGLDVTIDIANDPFFGRAGKMLANNQRDQNLKFELLIP VTSATNPTACMSFNYHQDAFGQKWGLNLENGDVAHTACVGFGLERIALALFAHHGLDVKKWPAKVVETLWG
Specific function: Catalyzes the ATP-dependent activation of L-alanine, and to a lesser extent of L-glycine and L-serine, and their transfer to the phosphopantetheine prosthetic group covalently attached to the vicinal carrier protein Atu2571 of yet unknown function. May pa
COG id: COG0172
COG function: function code J; Seryl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. Amino acid--[acyl-carrier-protein] ligase subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AACL_AGRT5 (Q7CWR3)
Other databases:
- EMBL: AE007869 - RefSeq: NP_355511.2 - ProteinModelPortal: Q7CWR3 - STRING: Q7CWR3 - GeneID: 1134611 - GenomeReviews: AE007869_GR - KEGG: atu:Atu2573 - NMPDR: fig|176299.4.peg.2658 - eggNOG: COG0172 - HOGENOM: HBG299620 - OMA: RIDHAND - ProtClustDB: PRK07080
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25699; Mature: 25699
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: BINDING 174-174 BINDING 176-176 BINDING 191-191 BINDING 250-250 BINDING 301-301
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFPQLAGTVHSFCGCELDHVSLLKSMDEGGDWTKDQKATDIVLTPAACYPLYPTIAKR CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHCCCHHHHHC GALPAGGGLYDIQSYCFRHEPSKDPARQQLFRMREYVCMGTESDVTEFRQTWMDRGVEMM CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KAVGLDVTIDIANDPFFGRAGKMLANNQRDQNLKFELLIPVTSATNPTACMSFNYHQDAF HHCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHC GQKWGLNLENGDVAHTACVGFGLERIALALFAHHGLDVKKWPAKVVETLWG CCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKSFPQLAGTVHSFCGCELDHVSLLKSMDEGGDWTKDQKATDIVLTPAACYPLYPTIAKR CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHCCCHHHHHC GALPAGGGLYDIQSYCFRHEPSKDPARQQLFRMREYVCMGTESDVTEFRQTWMDRGVEMM CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KAVGLDVTIDIANDPFFGRAGKMLANNQRDQNLKFELLIPVTSATNPTACMSFNYHQDAF HHCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHC GQKWGLNLENGDVAHTACVGFGLERIALALFAHHGLDVKKWPAKVVETLWG CCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194