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The map label for this gene is acd

Identifier: 15889829

GI number: 15889829

Start: 2542371

End: 2543552

Strand: Direct

Name: acd

Synonym: Atu2572

Alternate gene names: NA

Gene position: 2542371-2543552 (Clockwise)

Preceding gene: 15889828

Following gene: 159185272

Centisome position: 89.47

GC content: 60.83

Gene sequence:

>1182_bases
ATGAACGTGACCGTAGCGCCGCAGGATGAAACGCTGTCCGCGCGCGCGGGCCGTGTCGCGACCATTGCCGCAAAGCATGC
GGATGACGTGGATGTCACCGGCCGCTTCCCGCAGGAAGCCGTCGATGCCTTGCGCCGCGAACGTCTCCTCGGCATTCAGG
TGCCCTCCTCACTCGGCGGCGAAGGCGCCTCCATTCAAGAGATCGCCGATATCTGCGCCCGGCTCGGCCAGGCCTGTTCG
GCAACCGCAATGATTTTCGCCATGCACCACATCAAGCTGTCCAGCCTGGTGGAACATGGGGTCGACAGCACCTGGCATCC
GGGTTTTATGCGCCGCGTTGCCGGCGAACAGCTACTGCTCGGCTCCGCGACCACCGAAGGCGGCATTGGCGGCAATCTGC
GCAACTCTATCTGCGCGATCGAGGTCGAAGGAGACAGCTGTCGGCTGGAAAAGGATGCCACCGTCATTTCCTACGGCAGC
AATGCCGATGCGATCCTCATCACCTCACGCGCCCACAAGGATGCCGCACCCGCCGATCAGGTGATGACCGTCTTCCTGAA
AAATCAGTACACGCTTGAAAAGACCCATGTCTGGGATACGCTCGGCATGCGTGGCACCTGTTCGGACGGTTTCCTGTTTC
GCGGCGAAGCGCCGGCGGCACAGATTTTCCCGAAGCCTTTCGCGGAAATCGCCGCGCAATCCATGCTTGCAAGCTCGCAT
CTCCTGTGGAGCGCCGTCTGGTATGGCATCGCCTCGGACGCCGTGCTGCGCGCGCAATCCTTTGTCAGAGCCGCGGCGCG
CAAATCGCCCGGCACCGCCCCTCCCGGCGCAATCCGCCTTGCCGAGGTTTCCACCAAACTGCAGGTGGTCAAATCCAACA
TCATCGCCGGCATCAAGGCCTACGAGGACACCAAGAGCGATCCCGAAAAGCTGATGTCCATGGCCTTCGCGGTGGCGATG
AACAATGTGAAAATCTGCTCTTCGGAAACCATTCTTGAGATCATCGATCACGCCATGCTGGTCTGCGGCATCATGGGCTA
CAAGAACGGCACGCCCTATAGTCTCGGCCGGCATCTGCGCGACGCGCATTCCGCCCGGCTAATGATTTCCAATGACCGTA
TTCTCGGCAATTCCGCCAATCTCCTGCTGGTTCACAGGCAGGACACCAGCCTCTTGGGATAA

Upstream 100 bases:

>100_bases
TCGAATTCCCCGATAACCTGTTGAACCGCAAGTCTTTCGCCAGCATCAAGGCCATTGAAGACACCGTTAAGCTCATTCTG
GATGGTAAAGAGGCTGCCTG

Downstream 100 bases:

>100_bases
GACCATGGACATGCAAACATCGTTCCTCGATCGACTGTTCGAAGAAGGCCTGCTGATTGAAACGGGTGTGGACGGTCTTT
ATGGACGCAGCGGCCAGTTC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase Short-Chain Specific; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase Protein; Acyl-CoA Dehydrogenase Type 2 Domain Protein; Acyl-CoA Dehydrogenase-Like Protein; Carnitine Operon Oxidoreductase; Acyl-CoA Dehydrogenase Type 2 Domain-Containing Protein; Acyl-Coa Dehydrogenase

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNVTVAPQDETLSARAGRVATIAAKHADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGGEGASIQEIADICARLGQACS
ATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLLGSATTEGGIGGNLRNSICAIEVEGDSCRLEKDATVISYGS
NADAILITSRAHKDAAPADQVMTVFLKNQYTLEKTHVWDTLGMRGTCSDGFLFRGEAPAAQIFPKPFAEIAAQSMLASSH
LLWSAVWYGIASDAVLRAQSFVRAAARKSPGTAPPGAIRLAEVSTKLQVVKSNIIAGIKAYEDTKSDPEKLMSMAFAVAM
NNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLRDAHSARLMISNDRILGNSANLLLVHRQDTSLLG

Sequences:

>Translated_393_residues
MNVTVAPQDETLSARAGRVATIAAKHADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGGEGASIQEIADICARLGQACS
ATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLLGSATTEGGIGGNLRNSICAIEVEGDSCRLEKDATVISYGS
NADAILITSRAHKDAAPADQVMTVFLKNQYTLEKTHVWDTLGMRGTCSDGFLFRGEAPAAQIFPKPFAEIAAQSMLASSH
LLWSAVWYGIASDAVLRAQSFVRAAARKSPGTAPPGAIRLAEVSTKLQVVKSNIIAGIKAYEDTKSDPEKLMSMAFAVAM
NNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLRDAHSARLMISNDRILGNSANLLLVHRQDTSLLG
>Mature_393_residues
MNVTVAPQDETLSARAGRVATIAAKHADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGGEGASIQEIADICARLGQACS
ATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLLGSATTEGGIGGNLRNSICAIEVEGDSCRLEKDATVISYGS
NADAILITSRAHKDAAPADQVMTVFLKNQYTLEKTHVWDTLGMRGTCSDGFLFRGEAPAAQIFPKPFAEIAAQSMLASSH
LLWSAVWYGIASDAVLRAQSFVRAAARKSPGTAPPGAIRLAEVSTKLQVVKSNIIAGIKAYEDTKSDPEKLMSMAFAVAM
NNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLRDAHSARLMISNDRILGNSANLLLVHRQDTSLLG

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42039; Mature: 42039

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTVAPQDETLSARAGRVATIAAKHADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGG
CCEEECCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCC
EGASIQEIADICARLGQACSATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEE
GSATTEGGIGGNLRNSICAIEVEGDSCRLEKDATVISYGSNADAILITSRAHKDAAPADQ
ECCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCCEEEEEECCCCCCCCHHH
VMTVFLKNQYTLEKTHVWDTLGMRGTCSDGFLFRGEAPAAQIFPKPFAEIAAQSMLASSH
HHHHHHCCCEEEEHHHHHHHCCCCCCCCCCEEEECCCCCHHCCCCHHHHHHHHHHHHHHH
LLWSAVWYGIASDAVLRAQSFVRAAARKSPGTAPPGAIRLAEVSTKLQVVKSNIIAGIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
YEDTKSDPEKLMSMAFAVAMNNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLR
CCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DAHSARLMISNDRILGNSANLLLVHRQDTSLLG
HHHHCEEEEECCEEECCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MNVTVAPQDETLSARAGRVATIAAKHADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGG
CCEEECCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCC
EGASIQEIADICARLGQACSATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEE
GSATTEGGIGGNLRNSICAIEVEGDSCRLEKDATVISYGSNADAILITSRAHKDAAPADQ
ECCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCCEEEEEECCCCCCCCHHH
VMTVFLKNQYTLEKTHVWDTLGMRGTCSDGFLFRGEAPAAQIFPKPFAEIAAQSMLASSH
HHHHHHCCCEEEEHHHHHHHCCCCCCCCCCEEEECCCCCHHCCCCHHHHHHHHHHHHHHH
LLWSAVWYGIASDAVLRAQSFVRAAARKSPGTAPPGAIRLAEVSTKLQVVKSNIIAGIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
YEDTKSDPEKLMSMAFAVAMNNVKICSSETILEIIDHAMLVCGIMGYKNGTPYSLGRHLR
CCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DAHSARLMISNDRILGNSANLLLVHRQDTSLLG
HHHHCEEEEECCEEECCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA