Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185256
Identifier: 159185256
GI number: 159185256
Start: 2505709
End: 2506158
Strand: Direct
Name: 159185256
Synonym: Atu2533
Alternate gene names: NA
Gene position: 2505709-2506158 (Clockwise)
Preceding gene: 159185255
Following gene: 15889803
Centisome position: 88.18
GC content: 57.56
Gene sequence:
>450_bases ATGTATCTGCAATGGCCGATTCCTATCCTTGCGAAACCTCACGCGGATGAAAGGAACCCCATGCCTGAGAGATCGTCAGT GGCCGTCCCGGCAGCAATCTTCCTCGTCGCCGGCGCATCGTTGCTGCTCGCGGCCTGTGCATCGACCGTCATGAAAAGCT ATATCGGCGCGCCTATTACCAGCGTGATGCTGGATTACGGCCCGCCGGACAATATTTACAGCCTCGGCCCCGGCCAGCAG GCCTATCAATGGCGCAAGAACAAGACACAGGCCGTCGCCGGTTCATCGAGTGGCGAAGTGCGGACAACACGGCGTGGCGA GCGTTACGAAGTGTCCGAAACGCCGGGCTATATCGAGCGCATCGATTGTTATTATACGTTCTACACCCGCAATTCCGGCA GCGAATGGTATGTGACGAGCTTCCGGCAGCCTTCGCTCGAATGCGAATAA
Upstream 100 bases:
>100_bases TCGGCCTCAATATCGCCGGTCTCTGAGAAGCCGCGTCAGGGCGACTGCTGTCGCCGGAGCCGGGAACAGCAAGCCAAAGC CCTCCAGGGCTTTGCATGCA
Downstream 100 bases:
>100_bases TCCTTTCCGGATCTCGGATTTCGGTCCGTCGCCGCCCGCCTGTTTCGCGCTACGCGCCGTTCTACCGCCGCTTCCACGCT GAAAGCGGCGGTATTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MYLQWPIPILAKPHADERNPMPERSSVAVPAAIFLVAGASLLLAACASTVMKSYIGAPITSVMLDYGPPDNIYSLGPGQQ AYQWRKNKTQAVAGSSSGEVRTTRRGERYEVSETPGYIERIDCYYTFYTRNSGSEWYVTSFRQPSLECE
Sequences:
>Translated_149_residues MYLQWPIPILAKPHADERNPMPERSSVAVPAAIFLVAGASLLLAACASTVMKSYIGAPITSVMLDYGPPDNIYSLGPGQQ AYQWRKNKTQAVAGSSSGEVRTTRRGERYEVSETPGYIERIDCYYTFYTRNSGSEWYVTSFRQPSLECE >Mature_149_residues MYLQWPIPILAKPHADERNPMPERSSVAVPAAIFLVAGASLLLAACASTVMKSYIGAPITSVMLDYGPPDNIYSLGPGQQ AYQWRKNKTQAVAGSSSGEVRTTRRGERYEVSETPGYIERIDCYYTFYTRNSGSEWYVTSFRQPSLECE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16599; Mature: 16599
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLQWPIPILAKPHADERNPMPERSSVAVPAAIFLVAGASLLLAACASTVMKSYIGAPIT CEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SVMLDYGPPDNIYSLGPGQQAYQWRKNKTQAVAGSSSGEVRTTRRGERYEVSETPGYIER HHEECCCCCCCEEECCCCHHHHHHHCCCCEEECCCCCCCEEECCCCCEEECCCCCCCEEE IDCYYTFYTRNSGSEWYVTSFRQPSLECE EEEEEEEEEECCCCCEEEEECCCCCCCCC >Mature Secondary Structure MYLQWPIPILAKPHADERNPMPERSSVAVPAAIFLVAGASLLLAACASTVMKSYIGAPIT CEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SVMLDYGPPDNIYSLGPGQQAYQWRKNKTQAVAGSSSGEVRTTRRGERYEVSETPGYIER HHEECCCCCCCEEECCCCHHHHHHHCCCCEEECCCCCCCEEECCCCCEEECCCCCCCEEE IDCYYTFYTRNSGSEWYVTSFRQPSLECE EEEEEEEEEECCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA