Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185247
Identifier: 159185247
GI number: 159185247
Start: 2478439
End: 2479497
Strand: Direct
Name: 159185247
Synonym: Atu2510
Alternate gene names: NA
Gene position: 2478439-2479497 (Clockwise)
Preceding gene: 15889774
Following gene: 159185248
Centisome position: 87.22
GC content: 61.76
Gene sequence:
>1059_bases ATGCACCAGACGACCCGCCCGAGATTGCGCGATATCGGTTTCCGGCCCGGCCATTTCGAGACCGGCCCGCTCAACGCCAT CACCGATGTCGAAGGCGTGACTAGTGGCCATTCGACCGTGATCGAAGGCGAGACGATCCGCACCGGCGCAACCGCGATCC TGCCGCATGGCGGTAATCTCTTTCAGGACAAGGTGCCCGCCGCTTTCGCCGTTTATAACGGCTTCGGCAAATTTGTCGGC TCGACCCAGATCGAGGAACTCGGCGAACTCGAAACACCAATCATCCTCACCAATACGCTGGCGACAGGCCGGGCCATCGA GGCGATCAACCGCCATACGCTGGCGCAGCCGGGCAATGAGAAGGTCGTCTCGATCAATGCCGTCGTCGGCGAAACCAACG ATTCCCGCCTGAACGACATCCGTGCCGGCCGCCCGACCGTCGATGAGATATCAGCCGCGCTCAAAAACGCTGCCACAGGT CCGGTGGCCGAGGGCGGCGTTGGTGCTGGAACCGGTACGGTCGCTTTCGGCATGAAAGGCGGCATCGGCACCGCGTCGCG CCGCGTCACCATTTCCGGTCAGGCCTACACCATCGGCATTCTCGTGCAATCCAATTACGGCGGCCATCTGCTGGTCTGCG GCAAGCCCTATGTGAGCCCGGAACACAAAGACAAGGATGGCTCGATCGTCATCATCGTCGCCACCGACGCGCCGCTCTCC TCCCGCAATCTGAAGCGCCTCGCGGCCAGAAGCTTTGGTGGACTGGCGCGAACGGGTGCAGCACTCAGTAATGGCTCCGG TGACTACGCGCTGGCATTTTCCACCGATGAGCGGCTGCGCCGCACACCCGCGCGCCGCAAGGCGGTGACAGAATACCCTG AACTTTCCAACGATGCAATTTCGCCGCTGTTCGAAGCAGCGATAGAGGCGACCGAAGAGGCAATCCTCAATTCGCTCTGC GCGGCCACGACGACATCCGGTTTCAATGCCGGCACCGGCAAGGCCTCCACGGTCGAGGCCATTTCCATCGACACGCTTAA AACCCTTCTTTCAGCCTGA
Upstream 100 bases:
>100_bases CGTTTCCCGGTGAACTAGGCTAACGTCAAGTCAGAGCAAGGCTTTTGGCAAGCCGCGCCTGTTCCACCTTGTGCCTGCAC TCCGCAAAAGTGATCGCCCG
Downstream 100 bases:
>100_bases TCTTCCAGACGGAGTTTTCATGACCAGCCCATCCGGCCGCATCGTTTACGTCAACGGCGAATTCCTGCCCGAGGCAGACG CCCGCCTTTCCATCTTTGAC
Product: aminopeptidase
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; S58 Family Peptidase; L-Aminopeptidase DmpA; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MHQTTRPRLRDIGFRPGHFETGPLNAITDVEGVTSGHSTVIEGETIRTGATAILPHGGNLFQDKVPAAFAVYNGFGKFVG STQIEELGELETPIILTNTLATGRAIEAINRHTLAQPGNEKVVSINAVVGETNDSRLNDIRAGRPTVDEISAALKNAATG PVAEGGVGAGTGTVAFGMKGGIGTASRRVTISGQAYTIGILVQSNYGGHLLVCGKPYVSPEHKDKDGSIVIIVATDAPLS SRNLKRLAARSFGGLARTGAALSNGSGDYALAFSTDERLRRTPARRKAVTEYPELSNDAISPLFEAAIEATEEAILNSLC AATTTSGFNAGTGKASTVEAISIDTLKTLLSA
Sequences:
>Translated_352_residues MHQTTRPRLRDIGFRPGHFETGPLNAITDVEGVTSGHSTVIEGETIRTGATAILPHGGNLFQDKVPAAFAVYNGFGKFVG STQIEELGELETPIILTNTLATGRAIEAINRHTLAQPGNEKVVSINAVVGETNDSRLNDIRAGRPTVDEISAALKNAATG PVAEGGVGAGTGTVAFGMKGGIGTASRRVTISGQAYTIGILVQSNYGGHLLVCGKPYVSPEHKDKDGSIVIIVATDAPLS SRNLKRLAARSFGGLARTGAALSNGSGDYALAFSTDERLRRTPARRKAVTEYPELSNDAISPLFEAAIEATEEAILNSLC AATTTSGFNAGTGKASTVEAISIDTLKTLLSA >Mature_352_residues MHQTTRPRLRDIGFRPGHFETGPLNAITDVEGVTSGHSTVIEGETIRTGATAILPHGGNLFQDKVPAAFAVYNGFGKFVG STQIEELGELETPIILTNTLATGRAIEAINRHTLAQPGNEKVVSINAVVGETNDSRLNDIRAGRPTVDEISAALKNAATG PVAEGGVGAGTGTVAFGMKGGIGTASRRVTISGQAYTIGILVQSNYGGHLLVCGKPYVSPEHKDKDGSIVIIVATDAPLS SRNLKRLAARSFGGLARTGAALSNGSGDYALAFSTDERLRRTPARRKAVTEYPELSNDAISPLFEAAIEATEEAILNSLC AATTTSGFNAGTGKASTVEAISIDTLKTLLSA
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36555; Mature: 36555
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQTTRPRLRDIGFRPGHFETGPLNAITDVEGVTSGHSTVIEGETIRTGATAILPHGGNL CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCEEEEECCCCC FQDKVPAAFAVYNGFGKFVGSTQIEELGELETPIILTNTLATGRAIEAINRHTLAQPGNE CHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC KVVSINAVVGETNDSRLNDIRAGRPTVDEISAALKNAATGPVAEGGVGAGTGTVAFGMKG EEEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC GIGTASRRVTISGQAYTIGILVQSNYGGHLLVCGKPYVSPEHKDKDGSIVIIVATDAPLS CCCCCCEEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCC SRNLKRLAARSFGGLARTGAALSNGSGDYALAFSTDERLRRTPARRKAVTEYPELSNDAI HHHHHHHHHHHCCCHHHCCCHHCCCCCCEEEEECCHHHHHHCHHHHHHHHCCCCCCCHHH SPLFEAAIEATEEAILNSLCAATTTSGFNAGTGKASTVEAISIDTLKTLLSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHCC >Mature Secondary Structure MHQTTRPRLRDIGFRPGHFETGPLNAITDVEGVTSGHSTVIEGETIRTGATAILPHGGNL CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCEEEEECCCCC FQDKVPAAFAVYNGFGKFVGSTQIEELGELETPIILTNTLATGRAIEAINRHTLAQPGNE CHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC KVVSINAVVGETNDSRLNDIRAGRPTVDEISAALKNAATGPVAEGGVGAGTGTVAFGMKG EEEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC GIGTASRRVTISGQAYTIGILVQSNYGGHLLVCGKPYVSPEHKDKDGSIVIIVATDAPLS CCCCCCEEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCC SRNLKRLAARSFGGLARTGAALSNGSGDYALAFSTDERLRRTPARRKAVTEYPELSNDAI HHHHHHHHHHHCCCHHHCCCHHCCCCCCEEEEECCHHHHHHCHHHHHHHHCCCCCCCHHH SPLFEAAIEATEEAILNSLCAATTTSGFNAGTGKASTVEAISIDTLKTLLSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA