Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is yihV [H]

Identifier: 15889774

GI number: 15889774

Start: 2477336

End: 2478295

Strand: Direct

Name: yihV [H]

Synonym: Atu2509

Alternate gene names: 15889774

Gene position: 2477336-2478295 (Clockwise)

Preceding gene: 15889773

Following gene: 159185247

Centisome position: 87.18

GC content: 64.38

Gene sequence:

>960_bases
ATGGTAAAGGAACCGGGCGGCAAGCATGTGCTCTGCGTGGGTGCCGCCGTGCTCGACACCCTGTTTCGCGTGGCAGACAT
GCCGAAGGGCGAAGGCAAGGTCCTGCCCTATGAGGTGCTGCAGATCGCCGAAGGCATGGCGTCGAGCGCCGCTTATGCCG
TTCATCGCATGGGCGGCCGCGCCAGCCTCTGGGGTGCGGTGGGCGACGACGAAACCGGTACCCGCATCCTTCGCGATCTC
AGTGAAAGCGGCATAGACACATCAGGCATGACGGTTGCGCCCGGCGCGCGCTCGGCCCTGTCGACGATCATTATCGATAA
CAGGGGCGAACGGCTGATCGTGCCTTTCTACGATCATCGCCTTCACGAGAAAAAACGCGCCTGCACGCCGGAGGATATTG
CTCTCTTTGATGCGGTTCTGGTTGATGTGCGCTGGCCGGAACTGGCGCTCGATGTGCTCACCGTGGCGCGTGCGCTTGGC
AAACCCGCCATTCTGGATGGCGACGTAGCACCGGTGGAAACGCTGGAGGGGCTCGCCCCCGCCGCGACCCATATCGTCTT
TTCCGAACCCGCCGCCACCCGGCTGACCGGACTTGAAACGGTGAAGGACATGCTGCCGGTACTGCATGCCCGTTATCCGC
AGACCTTCATCGCCGTCACCGCCGGACCAGCGGGCTGCTGGTGGACGGAAGCCGACGATCCGACAGTGCATTTCCAGACG
ACGATGCAGGTCGAAGCGGTGGACACGCTGGCGGCGGGCGATATCTTCCACGGCACCTTTGCGCTGGCGATGGCTGAAGG
CATGCAAAGCCGCGCGGCCGTCCGCCTCTCCTCCGTTGCCGCCGCGCTCAAATGCACGGTCTTCGGCGGTCGCATCGGCG
CACCGACGCGCGAAGAGACCGAGGAAGCCATGCGGCAATGGCTGGAACGGGAAAGCGAACCTGCGTTGCGCGCCTCCTGA

Upstream 100 bases:

>100_bases
GCTTCGGCGATACGATCCACATTGCCATTGATCCGGCAACGGTGCATCTGTTCGACAAGGACAGCGGCAAGCGCATCTGA
ACACGACAGGAGCGAAGGGA

Downstream 100 bases:

>100_bases
GCGCATCCATTGCCCGCATAAAACTATTCCATTTTTGCGATGCCGTTTCCCGGTGAACTAGGCTAACGTCAAGTCAGAGC
AAGGCTTTTGGCAAGCCGCG

Product: sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDL
SESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALG
KPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT
TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWLERESEPALRAS

Sequences:

>Translated_319_residues
MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDL
SESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALG
KPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT
TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWLERESEPALRAS
>Mature_319_residues
MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDL
SESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALG
KPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT
TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWLERESEPALRAS

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082343, Length=299, Percent_Identity=36.7892976588629, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=23.1746031746032, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34098; Mature: 34098

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGR
CCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
ASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHR
CEECCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCHHHHEEEEEECCCCEEEEEHHHHH
LHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAILDGDVAPVETLEGLAP
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCH
AATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT
HHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEE
TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREET
EEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHH
EEAMRQWLERESEPALRAS
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGR
CCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
ASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHR
CEECCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCHHHHEEEEEECCCCEEEEEHHHHH
LHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAILDGDVAPVETLEGLAP
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCH
AATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT
HHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEE
TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREET
EEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHH
EEAMRQWLERESEPALRAS
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]