Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yihV [H]
Identifier: 15889774
GI number: 15889774
Start: 2477336
End: 2478295
Strand: Direct
Name: yihV [H]
Synonym: Atu2509
Alternate gene names: 15889774
Gene position: 2477336-2478295 (Clockwise)
Preceding gene: 15889773
Following gene: 159185247
Centisome position: 87.18
GC content: 64.38
Gene sequence:
>960_bases ATGGTAAAGGAACCGGGCGGCAAGCATGTGCTCTGCGTGGGTGCCGCCGTGCTCGACACCCTGTTTCGCGTGGCAGACAT GCCGAAGGGCGAAGGCAAGGTCCTGCCCTATGAGGTGCTGCAGATCGCCGAAGGCATGGCGTCGAGCGCCGCTTATGCCG TTCATCGCATGGGCGGCCGCGCCAGCCTCTGGGGTGCGGTGGGCGACGACGAAACCGGTACCCGCATCCTTCGCGATCTC AGTGAAAGCGGCATAGACACATCAGGCATGACGGTTGCGCCCGGCGCGCGCTCGGCCCTGTCGACGATCATTATCGATAA CAGGGGCGAACGGCTGATCGTGCCTTTCTACGATCATCGCCTTCACGAGAAAAAACGCGCCTGCACGCCGGAGGATATTG CTCTCTTTGATGCGGTTCTGGTTGATGTGCGCTGGCCGGAACTGGCGCTCGATGTGCTCACCGTGGCGCGTGCGCTTGGC AAACCCGCCATTCTGGATGGCGACGTAGCACCGGTGGAAACGCTGGAGGGGCTCGCCCCCGCCGCGACCCATATCGTCTT TTCCGAACCCGCCGCCACCCGGCTGACCGGACTTGAAACGGTGAAGGACATGCTGCCGGTACTGCATGCCCGTTATCCGC AGACCTTCATCGCCGTCACCGCCGGACCAGCGGGCTGCTGGTGGACGGAAGCCGACGATCCGACAGTGCATTTCCAGACG ACGATGCAGGTCGAAGCGGTGGACACGCTGGCGGCGGGCGATATCTTCCACGGCACCTTTGCGCTGGCGATGGCTGAAGG CATGCAAAGCCGCGCGGCCGTCCGCCTCTCCTCCGTTGCCGCCGCGCTCAAATGCACGGTCTTCGGCGGTCGCATCGGCG CACCGACGCGCGAAGAGACCGAGGAAGCCATGCGGCAATGGCTGGAACGGGAAAGCGAACCTGCGTTGCGCGCCTCCTGA
Upstream 100 bases:
>100_bases GCTTCGGCGATACGATCCACATTGCCATTGATCCGGCAACGGTGCATCTGTTCGACAAGGACAGCGGCAAGCGCATCTGA ACACGACAGGAGCGAAGGGA
Downstream 100 bases:
>100_bases GCGCATCCATTGCCCGCATAAAACTATTCCATTTTTGCGATGCCGTTTCCCGGTGAACTAGGCTAACGTCAAGTCAGAGC AAGGCTTTTGGCAAGCCGCG
Product: sugar kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDL SESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALG KPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWLERESEPALRAS
Sequences:
>Translated_319_residues MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDL SESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALG KPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWLERESEPALRAS >Mature_319_residues MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDL SESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALG KPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWLERESEPALRAS
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082343, Length=299, Percent_Identity=36.7892976588629, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=23.1746031746032, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 34098; Mature: 34098
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGR CCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC ASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHR CEECCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCHHHHEEEEEECCCCEEEEEHHHHH LHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAILDGDVAPVETLEGLAP HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCH AATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT HHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEE TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREET EEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHH EEAMRQWLERESEPALRAS HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGR CCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC ASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHR CEECCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCHHHHEEEEEECCCCEEEEEHHHHH LHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAILDGDVAPVETLEGLAP HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCH AATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT HHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEE TMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREET EEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHH EEAMRQWLERESEPALRAS HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]