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The map label for this gene is ycjP [C]

Identifier: 159185246

GI number: 159185246

Start: 2475317

End: 2476153

Strand: Direct

Name: ycjP [C]

Synonym: Atu2507

Alternate gene names: 159185246

Gene position: 2475317-2476153 (Clockwise)

Preceding gene: 15889771

Following gene: 15889773

Centisome position: 87.11

GC content: 58.9

Gene sequence:

>837_bases
ATGTCCACAAAGATCCTGAAACGCAAAAATCTCGACCGCATCGGCCTGTTCTTCGTGGCGCTGGTGATGATCTCGCCGGT
CATCCTGTTCTTCATCTGGATGATCTCGCTGTCGCTGAAATATGAAATCGACAACGGGGCCTATCCGCCGATCCTGATAC
CCGAACGTTTCGCCTGGTCGAACTATGTGAAGGTGTTCGAGGAGAATAGCTTCTTCCTCTATTTCTGGAATTCGGTCCTC
GTCACCGGCGCCGCCACCATTCTGGCGCTCGTCATCGGCGTGCCGGCCGGTTACGGCATCGCAAGGCTGAAGGCGGAAAA
ATCCGCTGTTGTCATCATGATCGCCCGTATGACGCCTGGCCTCTCCTTCCTCATTCCGCTGTTCCTGCTGTTCCAATGGC
TGAACCTCTTGGGCACGCTCTGGCCGCAGATCATCATCCATCTGGTGGTGACGGTGCCAATCGTCGTCTGGATCATGATC
GGTTATTTCGAGACAACCCCGAAGGAGCTGGAAGAGGCGGCAAGCATCGACGGCGCGTCCTCCTGGCAGGTGTTCCGGCT
GGTGGCGCTGCCGATTGCCAAGCCCGGCATCGTCGTCTCCTTCATTCTGGCGGTCATCTTCTCGTGGAACAACTTCGTCT
TCGGCATCGTGCTGGCCAGCCGTGAAACGCGCACCCTGCCGGTCGCGGTCTACAACATGCTGTCCTTCGAACAGGTCAGC
TGGGGACCGCTCGCGGCAGCTGCGCTGATCGTGACGCTACCGGTGCTGCTGCTCACCATGTTCGCGCAGAAACAGATCGT
GGCGGGTCTTACCGCCGGCGCCGTCAAGGGCGGCTGA

Upstream 100 bases:

>100_bases
CGGCCATGGCTGTCGTCTTCTTCGTCATCATCGTGGCGCTGTCCTTCGTGCTTCTGATGGTGCGCCAGCGCTCGCAATGG
AACGAGATGGAGGAACACTG

Downstream 100 bases:

>100_bases
ACCAACAACAAAGGGCATTCCATGCCCTTCCTCTTTAAACGCAATTCCGGACGCAAAACCGCGACGCACTTTTGCTGGAA
TTGCTCATAACGGGAACCTA

Product: ABC transporter, membrane spanning protein (sugar)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSTKILKRKNLDRIGLFFVALVMISPVILFFIWMISLSLKYEIDNGAYPPILIPERFAWSNYVKVFEENSFFLYFWNSVL
VTGAATILALVIGVPAGYGIARLKAEKSAVVIMIARMTPGLSFLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMI
GYFETTPKELEEAASIDGASSWQVFRLVALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVS
WGPLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAVKGG

Sequences:

>Translated_278_residues
MSTKILKRKNLDRIGLFFVALVMISPVILFFIWMISLSLKYEIDNGAYPPILIPERFAWSNYVKVFEENSFFLYFWNSVL
VTGAATILALVIGVPAGYGIARLKAEKSAVVIMIARMTPGLSFLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMI
GYFETTPKELEEAASIDGASSWQVFRLVALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVS
WGPLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAVKGG
>Mature_277_residues
STKILKRKNLDRIGLFFVALVMISPVILFFIWMISLSLKYEIDNGAYPPILIPERFAWSNYVKVFEENSFFLYFWNSVLV
TGAATILALVIGVPAGYGIARLKAEKSAVVIMIARMTPGLSFLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIG
YFETTPKELEEAASIDGASSWQVFRLVALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSW
GPLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAVKGG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=278, Percent_Identity=30.5755395683453, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1790464, Length=251, Percent_Identity=33.0677290836653, Blast_Score=114, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30770; Mature: 30639

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKILKRKNLDRIGLFFVALVMISPVILFFIWMISLSLKYEIDNGAYPPILIPERFAWS
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCCHHHHH
NYVKVFEENSFFLYFWNSVLVTGAATILALVIGVPAGYGIARLKAEKSAVVIMIARMTPG
HHHHHEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCCC
LSFLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
SWQVFRLVALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVS
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
WGPLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAVKGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STKILKRKNLDRIGLFFVALVMISPVILFFIWMISLSLKYEIDNGAYPPILIPERFAWS
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCCHHHHH
NYVKVFEENSFFLYFWNSVLVTGAATILALVIGVPAGYGIARLKAEKSAVVIMIARMTPG
HHHHHEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCCC
LSFLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
SWQVFRLVALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVS
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
WGPLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAVKGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]