Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is ybaN [H]

Identifier: 159185224

GI number: 159185224

Start: 2427791

End: 2428147

Strand: Direct

Name: ybaN [H]

Synonym: Atu2457

Alternate gene names: 159185224

Gene position: 2427791-2428147 (Clockwise)

Preceding gene: 159185220

Following gene: 15889732

Centisome position: 85.44

GC content: 62.75

Gene sequence:

>357_bases
ATGCGCCTTTTATACCTCTGTCTTGGCTGGCTGATGGTCGCGACCGGCATTGTCGGCGCGTTTCTTCCCGTTTTGCCCAC
CACGCCCTTTCTGCTTCTGGCGCTCTGGTGTTTTTCACGCTCCTCGCCGAAGCTCGAGGCATGGCTTCTCGCTCATCCGA
GGTTCGGCCCCTCGCTTCGTCGCTGGCGCGAGCGCGGCGCAATTGCCCGCAAGGCCAAGATCGCCGCACTTTCGGCCATG
ACGGTGAGTTATGCCGCCTTCTGGTTTCTGAGCGAGCCGCCACCGTTGCGGGCGACAATCGTCGCCGCCGTCATGCTCGG
TTCCGCGCTTTTCATCGTCACGCGGCCGGAAAGCTGA

Upstream 100 bases:

>100_bases
CCCGATTTTTCCGGTGCGGCCGGACCTGCGGCAACGGGACCACATCGATTTGGCGCCGGCGCTCTATCCTGAGTGATGAA
CTCATGATACCGGCTTGAAC

Downstream 100 bases:

>100_bases
AGGCGGGCTCTATCCTCTTGTTTTCGCCGCATTGTCCGACGCCGAAGCGAAAACGCTTCGGCTGGAAATGCTCTAGCGAT
GCCGCGATTGCGGCAGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRLLYLCLGWLMVATGIVGAFLPVLPTTPFLLLALWCFSRSSPKLEAWLLAHPRFGPSLRRWRERGAIARKAKIAALSAM
TVSYAAFWFLSEPPPLRATIVAAVMLGSALFIVTRPES

Sequences:

>Translated_118_residues
MRLLYLCLGWLMVATGIVGAFLPVLPTTPFLLLALWCFSRSSPKLEAWLLAHPRFGPSLRRWRERGAIARKAKIAALSAM
TVSYAAFWFLSEPPPLRATIVAAVMLGSALFIVTRPES
>Mature_118_residues
MRLLYLCLGWLMVATGIVGAFLPVLPTTPFLLLALWCFSRSSPKLEAWLLAHPRFGPSLRRWRERGAIARKAKIAALSAM
TVSYAAFWFLSEPPPLRATIVAAVMLGSALFIVTRPES

Specific function: Unknown

COG id: COG2832

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786674, Length=115, Percent_Identity=42.6086956521739, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007401 [H]

Pfam domain/function: PF04304 DUF454 [H]

EC number: NA

Molecular weight: Translated: 13072; Mature: 13072

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLYLCLGWLMVATGIVGAFLPVLPTTPFLLLALWCFSRSSPKLEAWLLAHPRFGPSLR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
RWRERGAIARKAKIAALSAMTVSYAAFWFLSEPPPLRATIVAAVMLGSALFIVTRPES
HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCC
>Mature Secondary Structure
MRLLYLCLGWLMVATGIVGAFLPVLPTTPFLLLALWCFSRSSPKLEAWLLAHPRFGPSLR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
RWRERGAIARKAKIAALSAMTVSYAAFWFLSEPPPLRATIVAAVMLGSALFIVTRPES
HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]