Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185220
Identifier: 159185220
GI number: 159185220
Start: 2422658
End: 2423242
Strand: Direct
Name: 159185220
Synonym: Atu2451
Alternate gene names: NA
Gene position: 2422658-2423242 (Clockwise)
Preceding gene: 15889719
Following gene: 159185224
Centisome position: 85.26
GC content: 60.85
Gene sequence:
>585_bases ATGCGTGGCGTATTTGCCGTTGTTTTCCTGATGCTCGTGCTCGCCGGTTGCGCCACCGCACCGTCACAGGTCACCAATGC CTGTGCGATCTTCGAGCAGCGGAACGGCATCTTCAACAACTGGCGGCGCGATGCAAAAGCCGCCGAGCGCGAATTCGGCG TGCCAGTACCGGTCATGATGGCGACGATCTACACCGAATCCGCCTTCCGCCCCTATGCGCGGCCGCCGCGCACCAAGCTC CTGGGCTTCATTCCCTGGACACGCCAGTCGACGGCCTATGGTTATGCACAGGCGCTTGATGGCACATGGAGTGTTTACCA GCGCGAAACCGGTCGCTGGTCGGCAAGCCGCACCGATTTCACCGATGCGATCCATTTCGTCGGCTGGTACCACGCCAAGA GCCAGCGCGAAAACGGCATTGCACTGAACGACCCCTATAATCTCTACCTCGCTTATTATTCCGGCCATGCCGGTTACGCG AAAGGCAGCTGGCGCAACAATTCCGCCGTCCAGAAGGCCGCCCGCCGCTCCGCCAACATGGCGATGCGTTACGAGGCACA GCTACAGCAGTGCGGATATCGCTGA
Upstream 100 bases:
>100_bases GTTAACGGCCGCCCGATCTGGGGCATTTGAATTAACCTTGTCTTAAAACCCGACGTTAATGGTTAGCAATTTAAGAATAG CGGAACGAAAGGGTTCCGTT
Downstream 100 bases:
>100_bases GGCAGGGCGGAAATTACCCGCCCTGACGATTCTCTAGGAAAATCCCCAGCAGCGTGCGTTATCCCCCGTAAGCCGCCAGA AAACCCCTGACCGCATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein; Lytic Transglycosylase; Transcriptional Regulator Protein
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MRGVFAVVFLMLVLAGCATAPSQVTNACAIFEQRNGIFNNWRRDAKAAEREFGVPVPVMMATIYTESAFRPYARPPRTKL LGFIPWTRQSTAYGYAQALDGTWSVYQRETGRWSASRTDFTDAIHFVGWYHAKSQRENGIALNDPYNLYLAYYSGHAGYA KGSWRNNSAVQKAARRSANMAMRYEAQLQQCGYR
Sequences:
>Translated_194_residues MRGVFAVVFLMLVLAGCATAPSQVTNACAIFEQRNGIFNNWRRDAKAAEREFGVPVPVMMATIYTESAFRPYARPPRTKL LGFIPWTRQSTAYGYAQALDGTWSVYQRETGRWSASRTDFTDAIHFVGWYHAKSQRENGIALNDPYNLYLAYYSGHAGYA KGSWRNNSAVQKAARRSANMAMRYEAQLQQCGYR >Mature_194_residues MRGVFAVVFLMLVLAGCATAPSQVTNACAIFEQRNGIFNNWRRDAKAAEREFGVPVPVMMATIYTESAFRPYARPPRTKL LGFIPWTRQSTAYGYAQALDGTWSVYQRETGRWSASRTDFTDAIHFVGWYHAKSQRENGIALNDPYNLYLAYYSGHAGYA KGSWRNNSAVQKAARRSANMAMRYEAQLQQCGYR
Specific function: Unknown
COG id: COG4764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21980; Mature: 21980
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVFAVVFLMLVLAGCATAPSQVTNACAIFEQRNGIFNNWRRDAKAAEREFGVPVPVMM CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH ATIYTESAFRPYARPPRTKLLGFIPWTRQSTAYGYAQALDGTWSVYQRETGRWSASRTDF HHHHHHHCCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCH TDAIHFVGWYHAKSQRENGIALNDPYNLYLAYYSGHAGYAKGSWRNNSAVQKAARRSANM HHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH AMRYEAQLQQCGYR HHHHHHHHHHCCCC >Mature Secondary Structure MRGVFAVVFLMLVLAGCATAPSQVTNACAIFEQRNGIFNNWRRDAKAAEREFGVPVPVMM CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH ATIYTESAFRPYARPPRTKLLGFIPWTRQSTAYGYAQALDGTWSVYQRETGRWSASRTDF HHHHHHHCCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCH TDAIHFVGWYHAKSQRENGIALNDPYNLYLAYYSGHAGYAKGSWRNNSAVQKAARRSANM HHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH AMRYEAQLQQCGYR HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA