| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
|---|---|
| Accession | NC_003062 |
| Length | 2,841,580 |
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The map label for this gene is livG [H]
Identifier: 159185204
GI number: 159185204
Start: 2380326
End: 2381087
Strand: Reverse
Name: livG [H]
Synonym: Atu2411
Alternate gene names: 159185204
Gene position: 2381087-2380326 (Counterclockwise)
Preceding gene: 15889683
Following gene: 15889681
Centisome position: 83.79
GC content: 59.19
Gene sequence:
>762_bases ATGAACACGGTTTCCGAAAACAGAACCAAAAGCCTGCTTTATCTCGATGGCGTCTCGGTCTCCTTCGATGGCTTCAAGGC GCTGAACTCGCTTTCTTTCGTCGTCGAGCCCGGCGAGCTTCGCGCCATCATAGGCCCGAATGGCGCCGGCAAGACAACGA TGATGGATATCATCACCGGCAAGACGCGGCCGGATACCGGTACGGTGTTGTTCGAGGACAGCATCGATCTCACCAAGAAG GACGAGGCGGATATTGCCCAGCTGGGCATCGGTCGGAAATTCCAGAAGCCGACCGTGTTCGAAAGCCACACCGTCTGGGA CAATCTGGAACTGGCGCTGAACCGCAAGCGCGGTGTCTTCGCCACGCTGTTCTACCGGCTGACGGAGGAAGACAAGGCAC GCATCGAGGAAATCCTCGCCACCGTGCGGCTTGGCCACCGTCGCGGCGATCTCGCGGCCAATCTTTCGCACGGTCAGAAA CAATGGCTTGAGATCGGCATGCTTCTGGCGCAGGAGCCGAAGCTGCTGCTGGTGGATGAGCCGGTGGCGGGCATGACGGA TGCGGAGACAGCCGAAACCACCGTGCTTTTGAAGGAAATCGCCAAGACCCGTTCGGTGGTGGTGGTGGAGCACGACATGG GCTTCATCCGCGAACTGGGCGTGAAGGTGACGTGTCTCGCCGAAGGTTCGGTGCTGGCGGAAGGGTCGATTGATTTCGTG TCGAGCGATCCGAAGGTGATCGAGAATTATCTGGGGCGGTGA
Upstream 100 bases:
>100_bases GGGCGGCGCGAGAAGCGTGTCGCGCGGGCAGCGGCGGCGGCCAAGCAGCCGGGCAACGACAGTGCGGCAACGGCCGCGCA ACAGGCGGCGGAGTAAGCCC
Downstream 100 bases:
>100_bases TGGTGGTGTTTGCGGTTTTACCCCCCTCTGCCCTGCCGGGCATCTCCCCCTCAAGGGGGGAGATCGGCAAGTCGCTAACA CCCTGCCCAAAAAGCGAGCG
Product: ABC transporter, nucleotide binding/ATPase protein (urea/amide)
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNTVSENRTKSLLYLDGVSVSFDGFKALNSLSFVVEPGELRAIIGPNGAGKTTMMDIITGKTRPDTGTVLFEDSIDLTKK DEADIAQLGIGRKFQKPTVFESHTVWDNLELALNRKRGVFATLFYRLTEEDKARIEEILATVRLGHRRGDLAANLSHGQK QWLEIGMLLAQEPKLLLVDEPVAGMTDAETAETTVLLKEIAKTRSVVVVEHDMGFIRELGVKVTCLAEGSVLAEGSIDFV SSDPKVIENYLGR
Sequences:
>Translated_253_residues MNTVSENRTKSLLYLDGVSVSFDGFKALNSLSFVVEPGELRAIIGPNGAGKTTMMDIITGKTRPDTGTVLFEDSIDLTKK DEADIAQLGIGRKFQKPTVFESHTVWDNLELALNRKRGVFATLFYRLTEEDKARIEEILATVRLGHRRGDLAANLSHGQK QWLEIGMLLAQEPKLLLVDEPVAGMTDAETAETTVLLKEIAKTRSVVVVEHDMGFIRELGVKVTCLAEGSVLAEGSIDFV SSDPKVIENYLGR >Mature_253_residues MNTVSENRTKSLLYLDGVSVSFDGFKALNSLSFVVEPGELRAIIGPNGAGKTTMMDIITGKTRPDTGTVLFEDSIDLTKK DEADIAQLGIGRKFQKPTVFESHTVWDNLELALNRKRGVFATLFYRLTEEDKARIEEILATVRLGHRRGDLAANLSHGQK QWLEIGMLLAQEPKLLLVDEPVAGMTDAETAETTVLLKEIAKTRSVVVVEHDMGFIRELGVKVTCLAEGSVLAEGSIDFV SSDPKVIENYLGR
Specific function: Probable component of a branched-chain amino-acid transport system [H]
COG id: COG4674
COG function: function code R; Uncharacterized ABC-type transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=224, Percent_Identity=25.8928571428571, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI21536378, Length=214, Percent_Identity=26.1682242990654, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI27262624, Length=220, Percent_Identity=29.0909090909091, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI27262626, Length=220, Percent_Identity=29.0909090909091, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI27477115, Length=184, Percent_Identity=29.8913043478261, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI27436953, Length=216, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI11967969, Length=226, Percent_Identity=26.9911504424779, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI45446740, Length=215, Percent_Identity=25.1162790697674, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=25.1162790697674, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=26.046511627907, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI9961252, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI4505771, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI255708477, Length=230, Percent_Identity=26.5217391304348, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI30795238, Length=218, Percent_Identity=24.3119266055046, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI27881501, Length=218, Percent_Identity=24.3119266055046, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI9961250, Length=217, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789864, Length=253, Percent_Identity=32.4110671936759, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1790525, Length=235, Percent_Identity=30.2127659574468, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1790190, Length=248, Percent_Identity=31.0483870967742, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786398, Length=225, Percent_Identity=32, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1788225, Length=231, Percent_Identity=30.3030303030303, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1787792, Length=240, Percent_Identity=27.9166666666667, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1788897, Length=239, Percent_Identity=29.7071129707113, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788472, Length=244, Percent_Identity=28.6885245901639, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1788761, Length=233, Percent_Identity=28.755364806867, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787089, Length=248, Percent_Identity=27.4193548387097, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI87082268, Length=247, Percent_Identity=29.9595141700405, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=26.3157894736842, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=26.1802575107296, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48995001, Length=231, Percent_Identity=29.004329004329, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=26.3829787234043, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081782, Length=195, Percent_Identity=34.3589743589744, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1789873, Length=211, Percent_Identity=27.0142180094787, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1789672, Length=248, Percent_Identity=25, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI87081791, Length=237, Percent_Identity=25.7383966244726, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI48994997, Length=250, Percent_Identity=27.2, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1788210, Length=232, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790544, Length=236, Percent_Identity=25.4237288135593, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI87081834, Length=215, Percent_Identity=27.906976744186, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1786872, Length=241, Percent_Identity=27.8008298755187, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788165, Length=243, Percent_Identity=27.9835390946502, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787370, Length=236, Percent_Identity=25, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1790162, Length=213, Percent_Identity=26.2910798122066, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788644, Length=203, Percent_Identity=27.0935960591133, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786803, Length=232, Percent_Identity=26.2931034482759, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789586, Length=242, Percent_Identity=25.2066115702479, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786345, Length=232, Percent_Identity=25.4310344827586, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87081709, Length=249, Percent_Identity=24.0963855421687, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787712, Length=220, Percent_Identity=25.9090909090909, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1786253, Length=206, Percent_Identity=25.7281553398058, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1787041, Length=248, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786698, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786563, Length=256, Percent_Identity=27.734375, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787547, Length=229, Percent_Identity=26.2008733624454, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1790467, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789032, Length=222, Percent_Identity=27.9279279279279, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788506, Length=256, Percent_Identity=25.390625, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789991, Length=245, Percent_Identity=22.4489795918367, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787164, Length=241, Percent_Identity=26.1410788381743, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787105, Length=194, Percent_Identity=27.8350515463918, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787182, Length=237, Percent_Identity=26.1603375527426, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17565586, Length=215, Percent_Identity=28.3720930232558, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17510237, Length=225, Percent_Identity=29.3333333333333, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115533608, Length=192, Percent_Identity=31.25, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17565938, Length=219, Percent_Identity=26.4840182648402, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17543740, Length=213, Percent_Identity=25.8215962441315, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25146777, Length=213, Percent_Identity=25.8215962441315, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17558664, Length=211, Percent_Identity=27.0142180094787, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71983516, Length=218, Percent_Identity=26.605504587156, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983523, Length=218, Percent_Identity=26.605504587156, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983510, Length=218, Percent_Identity=26.605504587156, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17541710, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567265, Length=219, Percent_Identity=26.9406392694064, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71992290, Length=205, Percent_Identity=28.2926829268293, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115535101, Length=213, Percent_Identity=26.7605633802817, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71988343, Length=210, Percent_Identity=30, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193202349, Length=211, Percent_Identity=25.1184834123223, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI85816269, Length=205, Percent_Identity=31.7073170731707, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24580553, Length=205, Percent_Identity=31.7073170731707, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI85724864, Length=205, Percent_Identity=31.7073170731707, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24580555, Length=205, Percent_Identity=31.7073170731707, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI161076682, Length=228, Percent_Identity=30.7017543859649, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI161076684, Length=228, Percent_Identity=30.7017543859649, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24581617, Length=228, Percent_Identity=30.7017543859649, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24581615, Length=228, Percent_Identity=30.7017543859649, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24666092, Length=224, Percent_Identity=26.3392857142857, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI28574150, Length=208, Percent_Identity=28.8461538461538, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI116007328, Length=208, Percent_Identity=28.8461538461538, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI85724858, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI85724856, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24580547, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24580551, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24580549, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24580545, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI221512771, Length=219, Percent_Identity=26.4840182648402, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574533, Length=204, Percent_Identity=29.9019607843137, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581191, Length=211, Percent_Identity=29.3838862559242, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581189, Length=211, Percent_Identity=29.3838862559242, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581193, Length=211, Percent_Identity=29.3838862559242, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581195, Length=211, Percent_Identity=29.3838862559242, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI85726357, Length=225, Percent_Identity=25.7777777777778, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136662, Length=246, Percent_Identity=24.7967479674797, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24662800, Length=219, Percent_Identity=26.9406392694064, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24648314, Length=225, Percent_Identity=25.7777777777778, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643674, Length=202, Percent_Identity=25.2475247524752, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI28571209, Length=203, Percent_Identity=24.6305418719212, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27822; Mature: 27822
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVSENRTKSLLYLDGVSVSFDGFKALNSLSFVVEPGELRAIIGPNGAGKTTMMDIITG CCCCCCCCCCEEEEEECCEECCCHHHHHCCEEEEECCCCEEEEECCCCCCCEEEEEEEEC KTRPDTGTVLFEDSIDLTKKDEADIAQLGIGRKFQKPTVFESHTVWDNLELALNRKRGVF CCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCEECCCCCCCCEEEEEECCCCHH ATLFYRLTEEDKARIEEILATVRLGHRRGDLAANLSHGQKQWLEIGMLLAQEPKLLLVDE EEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEC PVAGMTDAETAETTVLLKEIAKTRSVVVVEHDMGFIRELGVKVTCLAEGSVLAEGSIDFV CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCEEEEEECCCEEECCCEEEE SSDPKVIENYLGR CCCHHHHHHHHCC >Mature Secondary Structure MNTVSENRTKSLLYLDGVSVSFDGFKALNSLSFVVEPGELRAIIGPNGAGKTTMMDIITG CCCCCCCCCCEEEEEECCEECCCHHHHHCCEEEEECCCCEEEEECCCCCCCEEEEEEEEC KTRPDTGTVLFEDSIDLTKKDEADIAQLGIGRKFQKPTVFESHTVWDNLELALNRKRGVF CCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCEECCCCCCCCEEEEEECCCCHH ATLFYRLTEEDKARIEEILATVRLGHRRGDLAANLSHGQKQWLEIGMLLAQEPKLLLVDE EEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEC PVAGMTDAETAETTVLLKEIAKTRSVVVVEHDMGFIRELGVKVTCLAEGSVLAEGSIDFV CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCEEEEEECCCEEECCCEEEE SSDPKVIENYLGR CCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]