Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185199

Identifier: 159185199

GI number: 159185199

Start: 2375377

End: 2375796

Strand: Reverse

Name: 159185199

Synonym: Atu2403

Alternate gene names: NA

Gene position: 2375796-2375377 (Counterclockwise)

Preceding gene: 15889675

Following gene: 159185198

Centisome position: 83.61

GC content: 63.1

Gene sequence:

>420_bases
ATGAACCCGCAAAATTTCCGCTTAGTAGGCGCGGCACTGCTGTTTCTGACAGGCGGCGCGGCAAGCGCGGCGCTTGCCGA
GGAAGCGCCCGATTGCAAGGCGCCGCAGACGCAGGCGGATATGACCATCTGCGCCGGCAAGGACCATGAAAAGGCCGACA
AGGAGTTGAACGCCGCGTATCAGAAGCTTCGCAAGCAGCTTGCCGAGCGCGACAAGACGGCCGACGCAAGCGGCAAGGGT
GCGAACGATGCCTTGGTGATGGCCCAGCGCGCATGGGTGGCTTTTCGTGATGCCAATTGCGCGCTTGCCGGTTTTCAGGC
GCGCGGCGGCTCGATGGAGCCGATGCTGATCGCCTCCTGCCTCGCCGACATGAGCAGCAAGCGCGCCGACGAATTACGCC
AGCTCTCGGAAGGTTTCTGA

Upstream 100 bases:

>100_bases
CACGCCGATGGTGGCGGTCAATGCCAATTGTCTTGATGGTGTCGATCCGCGGGCGCTGAAATCGCAGGCTTTCGATGGCG
CGGCGGCTTGAGAGATGGCG

Downstream 100 bases:

>100_bases
ACGGCATGGGGCGGCGGATCATGATTGTCGGAAACGGGGAGCTGCCGCCGGGTGTGGCTGGTTTCATCGATCTTTCCGAC
CTCGTCATCCGTTTCAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAYQKLRKQLAERDKTADASGKG
ANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASCLADMSSKRADELRQLSEGF

Sequences:

>Translated_139_residues
MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAYQKLRKQLAERDKTADASGKG
ANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASCLADMSSKRADELRQLSEGF
>Mature_139_residues
MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAYQKLRKQLAERDKTADASGKG
ANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASCLADMSSKRADELRQLSEGF

Specific function: Unknown

COG id: COG3755

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli yecT [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009739 [H]

Pfam domain/function: PF07007 DUF1311 [H]

EC number: NA

Molecular weight: Translated: 14765; Mature: 14765

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAY
CCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
QKLRKQLAERDKTADASGKGANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASC
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCCCEEECCCCCCCCCCHHHHHHH
LADMSSKRADELRQLSEGF
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAY
CCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
QKLRKQLAERDKTADASGKGANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASC
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCCCEEECCCCCCCCCCHHHHHHH
LADMSSKRADELRQLSEGF
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]