Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185199
Identifier: 159185199
GI number: 159185199
Start: 2375377
End: 2375796
Strand: Reverse
Name: 159185199
Synonym: Atu2403
Alternate gene names: NA
Gene position: 2375796-2375377 (Counterclockwise)
Preceding gene: 15889675
Following gene: 159185198
Centisome position: 83.61
GC content: 63.1
Gene sequence:
>420_bases ATGAACCCGCAAAATTTCCGCTTAGTAGGCGCGGCACTGCTGTTTCTGACAGGCGGCGCGGCAAGCGCGGCGCTTGCCGA GGAAGCGCCCGATTGCAAGGCGCCGCAGACGCAGGCGGATATGACCATCTGCGCCGGCAAGGACCATGAAAAGGCCGACA AGGAGTTGAACGCCGCGTATCAGAAGCTTCGCAAGCAGCTTGCCGAGCGCGACAAGACGGCCGACGCAAGCGGCAAGGGT GCGAACGATGCCTTGGTGATGGCCCAGCGCGCATGGGTGGCTTTTCGTGATGCCAATTGCGCGCTTGCCGGTTTTCAGGC GCGCGGCGGCTCGATGGAGCCGATGCTGATCGCCTCCTGCCTCGCCGACATGAGCAGCAAGCGCGCCGACGAATTACGCC AGCTCTCGGAAGGTTTCTGA
Upstream 100 bases:
>100_bases CACGCCGATGGTGGCGGTCAATGCCAATTGTCTTGATGGTGTCGATCCGCGGGCGCTGAAATCGCAGGCTTTCGATGGCG CGGCGGCTTGAGAGATGGCG
Downstream 100 bases:
>100_bases ACGGCATGGGGCGGCGGATCATGATTGTCGGAAACGGGGAGCTGCCGCCGGGTGTGGCTGGTTTCATCGATCTTTCCGAC CTCGTCATCCGTTTCAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAYQKLRKQLAERDKTADASGKG ANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASCLADMSSKRADELRQLSEGF
Sequences:
>Translated_139_residues MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAYQKLRKQLAERDKTADASGKG ANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASCLADMSSKRADELRQLSEGF >Mature_139_residues MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAYQKLRKQLAERDKTADASGKG ANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASCLADMSSKRADELRQLSEGF
Specific function: Unknown
COG id: COG3755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli yecT [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009739 [H]
Pfam domain/function: PF07007 DUF1311 [H]
EC number: NA
Molecular weight: Translated: 14765; Mature: 14765
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAY CCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH QKLRKQLAERDKTADASGKGANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASC HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCCCEEECCCCCCCCCCHHHHHHH LADMSSKRADELRQLSEGF HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPQNFRLVGAALLFLTGGAASAALAEEAPDCKAPQTQADMTICAGKDHEKADKELNAAY CCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH QKLRKQLAERDKTADASGKGANDALVMAQRAWVAFRDANCALAGFQARGGSMEPMLIASC HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCCCEEECCCCCCCCCCHHHHHHH LADMSSKRADELRQLSEGF HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8121412; 11481430 [H]