Click here to switch to the map view.

The map label for this gene is 15889675

Identifier: 15889675

GI number: 15889675

Start: 2375806

End: 2376162

Strand: Reverse

Name: 15889675

Synonym: Atu2404

Alternate gene names: NA

Gene position: 2376162-2375806 (Counterclockwise)

Preceding gene: 159185200

Following gene: 159185199

Centisome position: 83.62

GC content: 57.42

Gene sequence:

>357_bases
ATGGCGACGGCGCATTATCATGGAAGCTGCCAGTGCGGCAGCGTCAGCTTCGAGGTCGATGCCGATCTCGATCATACCGT
CATCTGCAATTGTTCGCGCTGCAAGCGCCTTGGCTCCACGCTCGCCTTTGCGCCGCGGGAGAAATTCACCCTGCTTTCCG
GCGAGGACAAGCTGAGCGAATATCTCTTCAACAAGCACAAGATCCATCATTTTTTCTGCTCCACCTGCGGCATTGAAAGC
TTTGCTTATGCCGATGGGCCTGACGGCACGCCGATGGTGGCGGTCAATGCCAATTGTCTTGATGGTGTCGATCCGCGGGC
GCTGAAATCGCAGGCTTTCGATGGCGCGGCGGCTTGA

Upstream 100 bases:

>100_bases
CGTTTCGAGCCCGGCCAGAAGCGGGAAGTGACGTTGGTGCCGCTATCCGGCAAGCGCGAGGTTTACGGGTTTCGTCAACA
GATCATGGGGAGGTTATGAA

Downstream 100 bases:

>100_bases
GAGATGGCGATGAACCCGCAAAATTTCCGCTTAGTAGGCGCGGCACTGCTGTTTCTGACAGGCGGCGCGGCAAGCGCGGC
GCTTGCCGAGGAAGCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Protein Gfa

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MATAHYHGSCQCGSVSFEVDADLDHTVICNCSRCKRLGSTLAFAPREKFTLLSGEDKLSEYLFNKHKIHHFFCSTCGIES
FAYADGPDGTPMVAVNANCLDGVDPRALKSQAFDGAAA

Sequences:

>Translated_118_residues
MATAHYHGSCQCGSVSFEVDADLDHTVICNCSRCKRLGSTLAFAPREKFTLLSGEDKLSEYLFNKHKIHHFFCSTCGIES
FAYADGPDGTPMVAVNANCLDGVDPRALKSQAFDGAAA
>Mature_117_residues
ATAHYHGSCQCGSVSFEVDADLDHTVICNCSRCKRLGSTLAFAPREKFTLLSGEDKLSEYLFNKHKIHHFFCSTCGIESF
AYADGPDGTPMVAVNANCLDGVDPRALKSQAFDGAAA

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56118234, Length=111, Percent_Identity=37.8378378378378, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25149380, Length=117, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12710; Mature: 12579

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAHYHGSCQCGSVSFEVDADLDHTVICNCSRCKRLGSTLAFAPREKFTLLSGEDKLSE
CCCCCCCCCEEECCEEEEECCCCCCEEEECCHHHHHHCCCEEECCCCCEEEECCCHHHHH
YLFNKHKIHHFFCSTCGIESFAYADGPDGTPMVAVNANCLDGVDPRALKSQAFDGAAA
HHHCCCHHHEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
ATAHYHGSCQCGSVSFEVDADLDHTVICNCSRCKRLGSTLAFAPREKFTLLSGEDKLSE
CCCCCCCCEEECCEEEEECCCCCCEEEECCHHHHHHCCCEEECCCCCEEEECCCHHHHH
YLFNKHKIHHFFCSTCGIESFAYADGPDGTPMVAVNANCLDGVDPRALKSQAFDGAAA
HHHCCCHHHEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA