Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185186
Identifier: 159185186
GI number: 159185186
Start: 2353818
End: 2354243
Strand: Reverse
Name: 159185186
Synonym: Atu2383
Alternate gene names: NA
Gene position: 2354243-2353818 (Counterclockwise)
Preceding gene: 15889655
Following gene: 15889653
Centisome position: 82.85
GC content: 59.15
Gene sequence:
>426_bases ATGGCACGCAAGGAAAAGAAGAAAGCCGAACGCGGCGGCAAGCAGGGTAAGGGCGCGCCTCAACCTGAAAGGGACGTGGC CGAACAGCAGCTTTCCGGTCCGAAGAGCTTTCTTTATGTTGGCGGCCGTGACTGTCAGGTTGCCCATCTTCGCCAGATCG CCAGCAATTTCGGTGCCGAACTGATCCACCACGATGGCGGCCTGCGTGAGGCGGTCTCGCGCATCGATACCGTGCTTCCC TCCGTCGACTGCGTTTTCTGCCCGATCGACTGTATCAGCCACGATGCGTGTCTGCGGGTGAAGTCCGGTTGCAAGAAATT CGGCAAGACGTTCATTCCGCTGCGCAATGGCAGCAAATCCAGTCTGGAGCGGGCGCTGCAGACGATGAATGAACGGACCC CCAACGATGAGCGACGAGCGCAGTAA
Upstream 100 bases:
>100_bases CTTTATACTTTACTCCAAAACTCATCTTTATTATGGTGCCGGCATCCCGCTTATGGGGCCCGAAGATCGGGGCATGAAAA ATCAACCGGCAGGTGAGGGA
Downstream 100 bases:
>100_bases TTTTAAGGGTGAAGAGCCGGCGGCAGACGAAGCCTGCCGCGTGGAACTGCACAAGATGGCCGAACAGGCTGCCGATCCAG CCCTGACGGAAATGTATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MARKEKKKAERGGKQGKGAPQPERDVAEQQLSGPKSFLYVGGRDCQVAHLRQIASNFGAELIHHDGGLREAVSRIDTVLP SVDCVFCPIDCISHDACLRVKSGCKKFGKTFIPLRNGSKSSLERALQTMNERTPNDERRAQ
Sequences:
>Translated_141_residues MARKEKKKAERGGKQGKGAPQPERDVAEQQLSGPKSFLYVGGRDCQVAHLRQIASNFGAELIHHDGGLREAVSRIDTVLP SVDCVFCPIDCISHDACLRVKSGCKKFGKTFIPLRNGSKSSLERALQTMNERTPNDERRAQ >Mature_140_residues ARKEKKKAERGGKQGKGAPQPERDVAEQQLSGPKSFLYVGGRDCQVAHLRQIASNFGAELIHHDGGLREAVSRIDTVLPS VDCVFCPIDCISHDACLRVKSGCKKFGKTFIPLRNGSKSSLERALQTMNERTPNDERRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15562; Mature: 15431
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKEKKKAERGGKQGKGAPQPERDVAEQQLSGPKSFLYVGGRDCQVAHLRQIASNFGAE CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHH LIHHDGGLREAVSRIDTVLPSVDCVFCPIDCISHDACLRVKSGCKKFGKTFIPLRNGSKS HHHCCCCHHHHHHHHHHHHCCCCCEECCHHHHCCHHHHHHHHHHHHHCCEECCCCCCCHH SLERALQTMNERTPNDERRAQ HHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure ARKEKKKAERGGKQGKGAPQPERDVAEQQLSGPKSFLYVGGRDCQVAHLRQIASNFGAE CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHH LIHHDGGLREAVSRIDTVLPSVDCVFCPIDCISHDACLRVKSGCKKFGKTFIPLRNGSKS HHHCCCCHHHHHHHHHHHHCCCCCEECCHHHHCCHHHHHHHHHHHHHCCEECCCCCCCHH SLERALQTMNERTPNDERRAQ HHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA