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The map label for this gene is nolR [H]

Identifier: 159185137

GI number: 159185137

Start: 2250077

End: 2250397

Strand: Reverse

Name: nolR [H]

Synonym: Atu2278

Alternate gene names: 159185137

Gene position: 2250397-2250077 (Counterclockwise)

Preceding gene: 15889554

Following gene: 15889551

Centisome position: 79.2

GC content: 52.65

Gene sequence:

>321_bases
ATGGATAATCAATCTCTGTCGGAACATAGCATCGCGGCTGCAGACTTGCTCTCAGCGATGGCGAACCCTAAGCGCCTGAT
GATCTTGTGCACGCTGGTGGATACGGAAGTGCCTGTTGGTGTTCTCGCTTCACAGGTTGGTCTCAGTCAGTCTGCTCTTT
CGCAGCATTTGTCGAAATTGCGTGCCCAGCGACTGGTGAAGACACGACGGGATGCGCAGACCATCTATTATTCCAGCAAC
TCCGAATCCGTGAAGAAGATCCTCGCTTCACTTGAGGACATCTACTGCCAGGCGCAGAAGAGCAGCAAAACAGCGGCTTA
A

Upstream 100 bases:

>100_bases
GGTATATACAACGTATCGACCGAATTATAAAAACACCTTTAGAACACCTATAATAGCCACCATGACCGTCTCTCCGACTG
TCATCAGGAGACTTGAGCGT

Downstream 100 bases:

>100_bases
CGTTGGCCGATGCAAGCCCAGGCAAGATGAGTGAATTAAGACCGGCGCGTGACGCCGGTTTTTTTTGTTGAAGCGGCCTT
TTTCCTGCGTAAGCGTCTTG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MDNQSLSEHSIAAADLLSAMANPKRLMILCTLVDTEVPVGVLASQVGLSQSALSQHLSKLRAQRLVKTRRDAQTIYYSSN
SESVKKILASLEDIYCQAQKSSKTAA

Sequences:

>Translated_106_residues
MDNQSLSEHSIAAADLLSAMANPKRLMILCTLVDTEVPVGVLASQVGLSQSALSQHLSKLRAQRLVKTRRDAQTIYYSSN
SESVKKILASLEDIYCQAQKSSKTAA
>Mature_106_residues
MDNQSLSEHSIAAADLLSAMANPKRLMILCTLVDTEVPVGVLASQVGLSQSALSQHLSKLRAQRLVKTRRDAQTIYYSSN
SESVKKILASLEDIYCQAQKSSKTAA

Specific function: Negative transacting factor controlling the nod regulon. May control the expression of nodD1, nodD2, nodD3 and nodABC genes [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789021, Length=85, Percent_Identity=48.2352941176471, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11494; Mature: 11494

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQSLSEHSIAAADLLSAMANPKRLMILCTLVDTEVPVGVLASQVGLSQSALSQHLSKL
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHCCCHHHHHHHHHHH
RAQRLVKTRRDAQTIYYSSNSESVKKILASLEDIYCQAQKSSKTAA
HHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDNQSLSEHSIAAADLLSAMANPKRLMILCTLVDTEVPVGVLASQVGLSQSALSQHLSKL
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHCCCHHHHHHHHHHH
RAQRLVKTRRDAQTIYYSSNSESVKKILASLEDIYCQAQKSSKTAA
HHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1840615 [H]