Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is braC [C]
Identifier: 15889551
GI number: 15889551
Start: 2247389
End: 2248495
Strand: Reverse
Name: braC [C]
Synonym: Atu2276
Alternate gene names: 15889551
Gene position: 2248495-2247389 (Counterclockwise)
Preceding gene: 159185137
Following gene: 15889550
Centisome position: 79.13
GC content: 60.52
Gene sequence:
>1107_bases ATGAAACTGAAGACATTGACCAGCGTGACGCTCGCAGCGTCCTTCGCATTCGCACCCCTTGCCCATGCCGAAATCGTCAT CGGCCTGATTGCGCCGCTCACCGGCCCCGTTGCTGCCTATGGCGACCAGGTCAAGAATGGCGCCCAGACGGCAGTCAGTG AAATCAATAAAAAGGGCGGCATCCTCGGCGAACAGGTCGTGCTGAAGCTCGCTGACGATGGCGGCGAGCCCAAGCAGGGC GTTTCCGCGGCCAACCAGCTGGTTGCCGAAGGCATTCATTTCGTCGTCGGTCCGGTGACATCGGGCGTTGCCATTCCGGC ATCGGATGTCTTCGCCGAAAACGGCGTCCTGATGGTCACGCCGACGGCGACCGCGCCGGGACTGACCAATCGCGGTCTTT CCAACGTTTTCCGCACCTGCGGTCGTGATGACCAGCAGGCCGAGGTTGCGGCGAAATACGTTCTCGCCAACCTCAAGGGC AAGAAGATCGCCATCATTCACGACAAGGGCGCTTACGGTAAGGGTCTTGCCGATTCCTTCAAGGCGACGCTGAATGCCGG CGGCGTTACCGAAGTTCTCTACGATGCGCTGACACCTGGCGAAAAGGATCTCGGCGCGCTGACGGCCCGCCTGAAGTCCG ACAATGCGGACATCGTCTATTTCGGCGGTTACCATCCGGAAGCTGGTCTTCTGGTTCGCCAGCTGAAGGATATCGGCTCC AAGGCTGCCGTCATCGGCGGTGATGGCCTGTCGAACAGCGAATTCTGGAACATCGGCGCGAAGGCCGGCGAAGGCACGAT CTTCACCAACGCTTCCGACGCCCTGAAGAACGATGATTCCAAGGCCGCTGCCGAAGCCCTGAAGGCCGCCAACATTCCGG CTGAAGCCTTCACGCTCAACGCCTATGCCGCCGTCGAAGTCTTGAAGGCCGGTATCGAAAAGGCCGGCAGCGCCAAGGAT TCCGAGGCGGTCGCCAAGGTTCTGAAAAGCGGCGAGGCTTTCCCGACCGCAATCGGCAAGGTCACCTATGGTGACAATGG CGACCTGACCTCGCAGGCCTTCTCGCTCTTCAAGTGGCAGGACGGCAAGATCGTCGCAGCCGAATAA
Upstream 100 bases:
>100_bases ACATGGAACGAGTTTTCGCCGGGAGGCGTCCGATAGTTTCATTCGGTCGGCGCCCATGGCGCTCACCGGGTCCGCGACCC CTTTTTAAGGAGACACCAGG
Downstream 100 bases:
>100_bases GCTGATCGAACCGGCCGCACCTGTTGCGGCCGGTTTCATTTTACGGTCTGAAAAGAGGTAGGGCAGCGTGGTCGATGCCG AAACGCAAACCTTTGGGGAA
Product: ABC transporter, substrate binding protein (branched chain amino acid)
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGILGEQVVLKLADDGGEPKQG VSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTPTATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKG KKIAIIHDKGAYGKGLADSFKATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGS KAAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKAANIPAEAFTLNAYAAVEVLKAGIEKAGSAKD SEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKWQDGKIVAAE
Sequences:
>Translated_368_residues MKLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGILGEQVVLKLADDGGEPKQG VSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTPTATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKG KKIAIIHDKGAYGKGLADSFKATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGS KAAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKAANIPAEAFTLNAYAAVEVLKAGIEKAGSAKD SEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKWQDGKIVAAE >Mature_368_residues MKLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGILGEQVVLKLADDGGEPKQG VSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTPTATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKG KKIAIIHDKGAYGKGLADSFKATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGS KAAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKAANIPAEAFTLNAYAAVEVLKAGIEKAGSAKD SEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKWQDGKIVAAE
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=349, Percent_Identity=40.6876790830946, Blast_Score=265, Evalue=3e-72, Organism=Escherichia coli, GI1789867, Length=367, Percent_Identity=39.2370572207085, Blast_Score=260, Evalue=9e-71,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 37660; Mature: 37660
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCC ILGEQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVT CCHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHCCCEEEEE PTATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSF CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH KATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGS HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCC KAAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKAANIPAEAFTLN CEEEEECCCCCCCCEEECCCCCCCCEEEECCHHHHCCCCHHHHHHHHHHCCCCHHHEEEH AYAAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKWQ HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCEEEECCCCCHHHHHHHHHEEC DGKIVAAE CCEEEECC >Mature Secondary Structure MKLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCC ILGEQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVT CCHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHCCCEEEEE PTATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSF CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH KATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGS HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCC KAAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKAANIPAEAFTLN CEEEEECCCCCCCCEEECCCCCCCCEEEECCHHHHCCCCHHHHHHHHHHCCCCHHHEEEH AYAAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKWQ HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCEEEECCCCCHHHHHHHHHEEC DGKIVAAE CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]