Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yiiP [C]
Identifier: 159185136
GI number: 159185136
Start: 2245862
End: 2246764
Strand: Reverse
Name: yiiP [C]
Synonym: Atu2274
Alternate gene names: 159185136
Gene position: 2246764-2245862 (Counterclockwise)
Preceding gene: 15889550
Following gene: 159185135
Centisome position: 79.07
GC content: 59.03
Gene sequence:
>903_bases ATGAACAATGAAGGCAATGCGCTGGTCAGGAAGCTCGCATTCTGGGGCATCCCGCTTTCTTTCGGTGTACTCGGTCTCAA GCTCGTGGCCTGGTGGGTCACGGGCTCGGTAGCACTCCTGTCCGATGGTCTGGAATCGACGGTCAATGTGGTCGCAGCCT TCATCGCCTATTTCGTCATTCGTTACGCGCAGAAGCCGGCCGATGACGACCACCAGTTCGGCCACCACAAGGCGGAGTAT ATTTCCGCTGTCGTGGAAGGCGTGCTGATCGTCGTCGCTGCGCTTCTGATCGTGCAGGAGGCCTGGGGTGCTCTTTTCAA TCCGAGGCTGCCGGAAGCACCGGCCCTCGGTCTGGCCATCAACGCCATGGCCGGCGTGATCAACGCGGTGTGGGCGACGA TCCTGATCCGTGTTGGTAAAAAACATTCTTCACCCGCGCTTGCGGCTGACGGTCACCATATTATGTCTGACGTCGTGACC TCGGTCGGCGTTCTTGTCGGCCTCGTTCTGGCGCTGATGACGGGTTACGCCATTCTCGATCCGCTGCTTGCCATACTGGT CGCCATCAACATCCTGTTCCAGGGTTCCAAGGTCATTATTCATTCGCTTGGCGGGTTGATGGACCGGGCGGTGGAGCCGG AAGAGGACGAGGCGATCAAGAAGGCGATCGCCGAAAATTCAGGTGGCGTCATCGGCGTGCATGATCTGAGAACCCGCCGC GCCGGTTCGGCCGCCTTCATCGATTTCCATGTGGTCGTTCCCGCCAGCATGACGGTGCAGGAGGCGCATGATATTTGCGA CCGCCTTGAAGATGCCATAAGGGACGTCATACCGGGCGCCAGCCTTGCCATTCACGTCGAGCCTGAGGGCGAAAAGGCGC ATGGCGTCAAAGTCATCGTTTGA
Upstream 100 bases:
>100_bases AAGCCAATAGCGAACCGCGCGCACGGCCACCCCGTGCGCGCGGTTCGTGCGTTTTGGCAATCGATCATGCAATTCGTTCG CATCCGCACGGGGGCAGAAA
Downstream 100 bases:
>100_bases ACAGTCCGGGTCGCAATGATCCGGTTTTGAATAATCAGGAGTTTTGCATGTCCGTGACGGATGTTTCCGGCCTGTCGCAG CTGGGCACGAAGGTTGATAC
Product: cation efflux system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MNNEGNALVRKLAFWGIPLSFGVLGLKLVAWWVTGSVALLSDGLESTVNVVAAFIAYFVIRYAQKPADDDHQFGHHKAEY ISAVVEGVLIVVAALLIVQEAWGALFNPRLPEAPALGLAINAMAGVINAVWATILIRVGKKHSSPALAADGHHIMSDVVT SVGVLVGLVLALMTGYAILDPLLAILVAINILFQGSKVIIHSLGGLMDRAVEPEEDEAIKKAIAENSGGVIGVHDLRTRR AGSAAFIDFHVVVPASMTVQEAHDICDRLEDAIRDVIPGASLAIHVEPEGEKAHGVKVIV
Sequences:
>Translated_300_residues MNNEGNALVRKLAFWGIPLSFGVLGLKLVAWWVTGSVALLSDGLESTVNVVAAFIAYFVIRYAQKPADDDHQFGHHKAEY ISAVVEGVLIVVAALLIVQEAWGALFNPRLPEAPALGLAINAMAGVINAVWATILIRVGKKHSSPALAADGHHIMSDVVT SVGVLVGLVLALMTGYAILDPLLAILVAINILFQGSKVIIHSLGGLMDRAVEPEEDEAIKKAIAENSGGVIGVHDLRTRR AGSAAFIDFHVVVPASMTVQEAHDICDRLEDAIRDVIPGASLAIHVEPEGEKAHGVKVIV >Mature_300_residues MNNEGNALVRKLAFWGIPLSFGVLGLKLVAWWVTGSVALLSDGLESTVNVVAAFIAYFVIRYAQKPADDDHQFGHHKAEY ISAVVEGVLIVVAALLIVQEAWGALFNPRLPEAPALGLAINAMAGVINAVWATILIRVGKKHSSPALAADGHHIMSDVVT SVGVLVGLVLALMTGYAILDPLLAILVAINILFQGSKVIIHSLGGLMDRAVEPEEDEAIKKAIAENSGGVIGVHDLRTRR AGSAAFIDFHVVVPASMTVQEAHDICDRLEDAIRDVIPGASLAIHVEPEGEKAHGVKVIV
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=299, Percent_Identity=31.7725752508361, Blast_Score=148, Evalue=4e-37, Organism=Escherichia coli, GI1786966, Length=296, Percent_Identity=25, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 31775; Mature: 31775
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNEGNALVRKLAFWGIPLSFGVLGLKLVAWWVTGSVALLSDGLESTVNVVAAFIAYFVI CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH RYAQKPADDDHQFGHHKAEYISAVVEGVLIVVAALLIVQEAWGALFNPRLPEAPALGLAI HHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NAMAGVINAVWATILIRVGKKHSSPALAADGHHIMSDVVTSVGVLVGLVLALMTGYAILD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLAILVAINILFQGSKVIIHSLGGLMDRAVEPEEDEAIKKAIAENSGGVIGVHDLRTRR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHC AGSAAFIDFHVVVPASMTVQEAHDICDRLEDAIRDVIPGASLAIHVEPEGEKAHGVKVIV CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEC >Mature Secondary Structure MNNEGNALVRKLAFWGIPLSFGVLGLKLVAWWVTGSVALLSDGLESTVNVVAAFIAYFVI CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH RYAQKPADDDHQFGHHKAEYISAVVEGVLIVVAALLIVQEAWGALFNPRLPEAPALGLAI HHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NAMAGVINAVWATILIRVGKKHSSPALAADGHHIMSDVVTSVGVLVGLVLALMTGYAILD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLAILVAINILFQGSKVIIHSLGGLMDRAVEPEEDEAIKKAIAENSGGVIGVHDLRTRR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHC AGSAAFIDFHVVVPASMTVQEAHDICDRLEDAIRDVIPGASLAIHVEPEGEKAHGVKVIV CCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]